Protein Info for AMB_RS06630 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 525 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 64 to 88 (25 residues), see Phobius details amino acids 97 to 118 (22 residues), see Phobius details amino acids 124 to 143 (20 residues), see Phobius details amino acids 151 to 168 (18 residues), see Phobius details amino acids 180 to 205 (26 residues), see Phobius details amino acids 212 to 231 (20 residues), see Phobius details amino acids 269 to 294 (26 residues), see Phobius details amino acids 306 to 325 (20 residues), see Phobius details amino acids 331 to 351 (21 residues), see Phobius details amino acids 362 to 380 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb1304)

Predicted SEED Role

"FIG00779632: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W7R7 at UniProt or InterPro

Protein Sequence (525 amino acids)

>AMB_RS06630 hypothetical protein (Magnetospirillum magneticum AMB-1)
MKTRPVLLILPALFTALLFAMGAASQPFWQVFNLDPDYYYLTNGLMLVEGLAPTDMGHPG
TPVHVFFAIVYRLMHVGEPTGAIVDAVLRNPEHHLRVVTWVMYPLIGLSLVALGRAILTA
TGRLAPALLAQGAPFLSMIIPKFGLHPKPEGFLIIAVAWVLVMALRVARAETLTDRQVGW
LGLALGFGIACKIQFVALGLIPLFILDRRRLFLVLPLTTAAGFLFFFSPALPSLDIFLGW
WSKVLTHSGAYGTGEAGMVQAGRYPRAVIGLFGSKIVFTVVIVLSLFALAGYVRLRRRGL
IPADRLAGLLAGMVAAQVFTILAVAKQPAAHYLVPALLLTGPSLAILFVLSGKVFSPRPH
LRAWAGIGLVLVVLSAHASWKQYAELARWTAETQAFDMSRFAACAKIDYDSASSLPYALQ
RGDMNSKARYSPKLAEFMPKDHYTWFINEHAWWSSGFMQWNKPMKLAEVLAAYPCSIFRG
NQGSRMIEWATRELGSFRPDDGCPVGEENVFTFGIRCDGSTPLAK