Protein Info for AMB_RS05545 in Magnetospirillum magneticum AMB-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 651 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 44 to 65 (22 residues), see Phobius details amino acids 75 to 95 (21 residues), see Phobius details amino acids 110 to 129 (20 residues), see Phobius details amino acids 135 to 155 (21 residues), see Phobius details amino acids 168 to 189 (22 residues), see Phobius details amino acids 200 to 228 (29 residues), see Phobius details amino acids 247 to 267 (21 residues), see Phobius details amino acids 344 to 366 (23 residues), see Phobius details amino acids 378 to 402 (25 residues), see Phobius details amino acids 421 to 443 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb1087)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W8D4 at UniProt or InterPro

Protein Sequence (651 amino acids)

>AMB_RS05545 hypothetical protein (Magnetospirillum magneticum AMB-1)
MRSDLNSGLRPVLGPALALLLALPIALGSLPPFRFGYWDKAEPMVVWLNLCSFLGALALA
RCAWVMPRATVPNLFHPYVLAPLAVALWSLAAAPFDALPRLSLFGVPQSGLGALWFLDFA
ILIACGLMVRDCRVAWRLLCWAAAAITLVIAGLKVSDHFFTSIESTLLLYVDAYYGWIGV
TLPVLAWWWTRHRRDWPLTVTLAIAALACVYSSHSLTAWSILIGGTALVLASERLPVQPV
RLFTRSPWGSAVLVAVGALLPPFALRAAKPLLNSPSLLDRLHLQEMVLADMARSPSWLMG
QGWGRVQDAFHGNLNVTGENLWQPTWIFLSSDYFSSHNWLLDTVHAVGLPGAGLVLAGFL
VLPLYAAPAARPAATMLALAYALISAVWFHLCFSLPFFALAMAAVGRSAREVEISALQRR
AAAWSLMAVAALPMLGAGALAEYGLNIGAIHRGLTGGAVFDRAWPVDPRGSDLEAAEVIR
DAFADLAKDERRPNPAAIPGARAMMATLAARIPQSDTVQMITIGLGVQSYLHFSKELAWL
APDLPSSRDLWRPWLDRLLWLAPGRTDQAIGYLTDRAVAGDLLAVEQVVTAILKRNPSDP
VGLYFRGLALILLRDPTVRPLAVDSFRASVAAGIERFMPLDPVVRQLIESR