Protein Info for AMB_RS03070 in Magnetospirillum magneticum AMB-1

Annotation: prolipoprotein diacylglyceryl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 269 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 59 to 79 (21 residues), see Phobius details amino acids 97 to 116 (20 residues), see Phobius details amino acids 123 to 144 (22 residues), see Phobius details amino acids 178 to 198 (21 residues), see Phobius details amino acids 205 to 223 (19 residues), see Phobius details amino acids 235 to 262 (28 residues), see Phobius details TIGR00544: prolipoprotein diacylglyceryl transferase" amino acids 2 to 265 (264 residues), 233.1 bits, see alignment E=2.1e-73 PF01790: LGT" amino acids 12 to 260 (249 residues), 250.5 bits, see alignment E=7.5e-79

Best Hits

Swiss-Prot: 100% identical to LGT_MAGSA: Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase (lgt) from Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)

KEGG orthology group: K13292, phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC: 2.-.-.-] (inferred from 100% identity to mag:amb0595)

Predicted SEED Role

"Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)" (EC 2.4.99.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.-.-.-

Use Curated BLAST to search for 2.-.-.- or 2.4.99.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2W9S6 at UniProt or InterPro

Protein Sequence (269 amino acids)

>AMB_RS03070 prolipoprotein diacylglyceryl transferase (Magnetospirillum magneticum AMB-1)
MTFALAYPHIDPIALQIGPIAIRWYALAYIAGLMLGWRYVKFLVARPPNAMTELEVDDFL
VWATMGVVLGGRLGYVLFYKPLYYLENPLEIPMVWQGGMSFHGGALGVIVGIIAFSRFRG
RNLFQVGDVICCAVPIGLFFGRIANFVNGELFGRVAPDVDWAMVFPGGGPLPRHPSQLYE
AGLEGAVLFLVLFGLWRLTGIRHRAGALSGVFLAGYGLARIASEFFRQPDAHLGFLWGGA
TMGQLLSIPQVLVGLALLAWALRRGAKAA