Protein Info for AMB_RS01615 in Magnetospirillum magneticum AMB-1

Annotation: molecular chaperone

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 302 PF01430: HSP33" amino acids 6 to 294 (289 residues), 232.4 bits, see alignment E=3.6e-73

Best Hits

Swiss-Prot: 33% identical to HSLO_ERWT9: 33 kDa chaperonin (hslO) from Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99)

KEGG orthology group: K04083, molecular chaperone Hsp33 (inferred from 100% identity to mag:amb0318)

Predicted SEED Role

"Heat shock protein HSP33"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2WAK3 at UniProt or InterPro

Protein Sequence (302 amino acids)

>AMB_RS01615 molecular chaperone (Magnetospirillum magneticum AMB-1)
MPGLTDSVLPFSVMGGAVRGRLARLGTALDTVLDDQHGYPEPVAALLADTMALAAVLATS
MKFDGIFTLQAQGDGPVSLLVADVTSGGDLRAHARFDAARLGQVPPGGRASVPAMLGKGY
LAFTVDQGPDTDRYQGIVELAGATLEDCARAYFKQSEQLDTAIEAMVRPPSGGQGWAATA
LMIQRMPAGTGSAPILVADEAEETWRRAEILLASVKGEEMVDPALSSEQLLYRLYHAEQL
QVFEAKEMRARCRCSRDRVEATLRSLPPGEVAQVADEQGQIVVTCEFCRTDHVFRLTELQ
SS