Protein Info for AMB_RS00315 in Magnetospirillum magneticum AMB-1

Annotation: cytidyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00125: cytidyltransferase-like domain
  • amino acids 36 to 99 (64 residues), 50.3 bits, E=1.1e-17
• PF01467: CTP_transf_like
  • amino acids 39 to 166 (128 residues), 59.2 bits, E=5e-20
• PF00294: PfkB
  • amino acids 205 to 504 (300 residues), 66.4 bits, E=2.9e-22

Best Hits

KEGG orthology group: None (inferred from 100% identity to mag:amb0062)

Predicted SEED Role

"Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)" in subsystem Rhamnose containing glycans (EC 2.7.7.39)

MetaCyc Pathways

• 1-(sn-glycero-1-phospho)-1D-myo-inositol biosynthesis (1/3 steps found)
• 1-(sn-glycero-3-phospho)-1D-myo-inositol biosynthesis (1/3 steps found)
• lipid A-core biosynthesis (P. gingivalis) (1/7 steps found)
• poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis (3/10 steps found)
• poly(glycerol phosphate) wall teichoic acid biosynthesis (3/11 steps found)
• poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis) (3/12 steps found)
• poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus) (3/14 steps found)

KEGG Metabolic Maps

• Glycerophospholipid metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.39

Sequence Analysis Tools

See Q2WBA9 at UniProt or InterPro

Protein Sequence (518 amino acids)

>AMB_RS00315 cytidyltransferase (Magnetospirillum magneticum AMB-1)
MSNETSSPSPAARDKVQSIESLAERAEKAREAGKTVVLCHGVFDLVHLGHVRHVEAARRE
GDILFVTLTADRFVNKGPGRPIFSENMRAEMLAALACVDGVGVNHGSSAESVLDAIKPDI
YVKGSDYENPDEDITGKINSEREAVERHGGRVVFTKDITFSSSSLINRYLDVYDPPLRDC
LNSLRERDALNDILELIEKIKDMKVLLVGDTIMDEYQFVTPQGKAQKENIIATLFRGREE
YAGGVIAAANHVASFCREVEIITGLGGETDDEAFIRSHLRDNVRLTTVSMPGRPTTRKTR
YVEPSHTRKMFEVYVMDDAPLAAAQVKVLDQLIADRAPEFDVVIVTDFGHGLVGPSTIDV
LVKHSRFLAVNAQTNSGNFGFNMITKYPKADYVCIDAPEARLAVGDKFSDIRDVVGTMLP
KRIECPRMIVTHGGHGCYTYDCATEMHRIPAFTKQVVDTVGAGDAFLAVTSPLVAAGGSM
EHVGFIGNAAGAMKVGIVGHRKSVEKVPLVKFVTALLK