Protein Info for ABZR88_RS21160 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycosyltransferase family 2 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 362 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 171 to 191 (21 residues), see Phobius details amino acids 273 to 296 (24 residues), see Phobius details amino acids 302 to 322 (21 residues), see Phobius details amino acids 329 to 351 (23 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 40 to 239 (200 residues), 48.9 bits, see alignment E=7.8e-17 PF00535: Glycos_transf_2" amino acids 41 to 209 (169 residues), 80.5 bits, see alignment E=1.5e-26

Best Hits

KEGG orthology group: None (inferred from 36% identity to msv:Mesil_1491)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (362 amino acids)

>ABZR88_RS21160 glycosyltransferase family 2 protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MFIVLSAIFFFLILRFVVSLFNFLSDPKLRRTAIHHQHLVSILIPARDEEDNIIPLLQSI
VDQDYRDYEVIILDDGSSDHTYQRCVNFAAKHDNFRVIKGQPLPADWLGKNYACYQLAQQ
ARGEYLLFLDADEKVEPGLINSALHRMQLRNLALLSLFTNQEMRTTGEQLVVPLMHYILL
NLLPLQLVYLVKNQAVAAASGQFMLFNADIYRTNQWHAQVRGKVVEDVEIMRAVKASGHN
GEALLANNMISCRMYENYGEAVQGFSKNFLAAFNYNVFAFIIYLLLLTGGPLIVIMTLNS
NLIVFMCGLILLTRIMISLLSGQNVLRNIILHPLQMLSLTAIGFLSVQQYLTKTTVWKGR
KV