Protein Info for ABZR88_RS20455 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: energy transducer TonB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 336 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF03544: TonB_C" amino acids 256 to 333 (78 residues), 65.8 bits, see alignment E=2e-22 TIGR01352: TonB family C-terminal domain" amino acids 259 to 333 (75 residues), 49.4 bits, see alignment E=2.2e-17

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (336 amino acids)

>ABZR88_RS20455 energy transducer TonB (Mucilaginibacter yixingensis YX-36 DSM 26809)
MKHFFTCFFLLTAACFAKAQGQSTVYYLNKKGQITTSKDSALIVRTVTSQDAATGLYAFN
DATTSGKQICSGQTTKINQLYLQGHFTAYYPSGSKLADAVFNNDQRQVITIYYPNGQQYL
TEKTTYESPSSGKYGRITDVQILTCADSTGKMLTANGNGSFIDYQPQIAAPEWSSAAFRY
GAFHEGYASGELKNGEKDGKWEGGNRLFAYEDLYQGGKFVKGKSFNNGKTYEYTELEKSA
EFNGGITAFYQCLSQNVVYPQSARRSKISGEVFVTFVINFDGHLTEAKVLRSPHPDLSAA
ALQALAQCPAWTPGTQRGRPVRQQFTVPLTFTLPGN