Protein Info for ABZR88_RS19580 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: CusA/CzcA family heavy metal efflux RND transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1455 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 344 to 361 (18 residues), see Phobius details amino acids 367 to 387 (21 residues), see Phobius details amino acids 394 to 416 (23 residues), see Phobius details amino acids 452 to 472 (21 residues), see Phobius details amino acids 484 to 507 (24 residues), see Phobius details amino acids 537 to 558 (22 residues), see Phobius details amino acids 878 to 897 (20 residues), see Phobius details amino acids 904 to 923 (20 residues), see Phobius details amino acids 930 to 954 (25 residues), see Phobius details amino acids 975 to 996 (22 residues), see Phobius details amino acids 1008 to 1034 (27 residues), see Phobius details amino acids 1046 to 1064 (19 residues), see Phobius details TIGR00914: heavy metal efflux pump, CzcA family" amino acids 1 to 1043 (1043 residues), 1202.2 bits, see alignment E=0 PF00873: ACR_tran" amino acids 5 to 1034 (1030 residues), 953.9 bits, see alignment E=9.7e-291 PF02321: OEP" amino acids 1072 to 1246 (175 residues), 68.5 bits, see alignment E=6.8e-23 amino acids 1266 to 1451 (186 residues), 68 bits, see alignment E=9.8e-23

Best Hits

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1455 amino acids)

>ABZR88_RS19580 CusA/CzcA family heavy metal efflux RND transporter (Mucilaginibacter yixingensis YX-36 DSM 26809)
MFDRIISFSVRNKVTVGILTLLLVIAGIWSAANLPLDAQPDITNNQVQIITQAPTLGAQE
VEQYITAPVELAMANIAGIIEKRSISRSGISVITLVFKDNVDIYWARQQVAAQLKEAEDN
IPQGVGEPSLAPITTGLGEIYQYSIHTKKGYENKYTATDLRTIQDWLVRTQLAGTLGVAE
VSGWGGYVKEYEIALDNDKLNSFGVTIPEVYSALQKNNENTGGSYIEQQSNAYFIRGLGQ
VKSLDDISKIVIKNSGGTPILVRDVAAVQLGTATRYGAVTRNGEGEVVAGVTLMLKGENF
SQVIKNVKARMVQIQKSLPEGVVIEPFIDRTELVGRAIGTVERNLLEGALIVIFVLVLLL
GNWRAGLVVASVIPLAMLFAFMLMKLFGVSGNLMSLGAIDFGLIVDGAVIIVESVVHHIT
AGRYAKENIKELSRDQMNEEVHSSAGKLMQSAAFGQIIILIVYLPLLSLVGIEGKMFRPM
AETVAFAILGAFILSLTYVPMASALFLSRKTEHKPNISDHIIGFCQRVYQKALIGVLRFK
VLTIALVFAIFGIAIWAFSRMGGEFIPTLEEGDLTVEISMMQGTSLTEVVKSFSKAEKLL
KDKFPEIKQAVTRIGSSEIPTDPMPMERGDMMLAMKPKSEWKNAKTREEMMAKMEETLNE
LPGIHASISQPMQMRFNELMTGIRQDVAIKIYGDDLDELASQANKIAADIKPINGVSDIF
VEKVSGLPQIQVNYNRDKMAQYGLNISDVNMILKTAFAGSVAGVVFEGEKRFNMVVRLNR
DLRENISSVQNLLVPLPSGNKVPLNQVADIDFQEAPSQISREDGKRRIYVGFNVTARDVQ
STVTEIQQKLDKALKLPSGYYLSYGGQFQNLQAARARLSIAVPAALLFILVLLYVTFRSV
KESLLIFTAVPLASIGGIAALLIRGMPFSISAGVGFIALFGVAVLNGIVLIGYFNQLKDE
GINDIYQRVLEGTKIRLRPVLMTAAVASLGFLPMALSSSAGAEVQKPLATVVIGGLITAT
FLTLFVLPCLYLLFNRKTVAISKASKVLAVLIAGFSFFAGSANAQTRPALTLDSAISRAL
QNNLEVRAANLLVEQSRSLKGAATDLPKTELMLTQDPTSGGNIDNGLSVSQNIAWPGLYS
NQRKLADQQIKLAEHSGRATKAEITRQVRNAWYAYLLSRETLRVLNFQDSIYNGFVQRAT
VRVKTGEASNLELISAKNKYQEVQSLKISAQADLATNELALRRLLNSTEPMVIAESDLAL
ALPGLSDTVNTAANPQTLLGLQQIEVANAKVAVERAKLMPDITLGYTQQLLIGAFNPANI
DRNYSPGTRIGGFQLGLALPVFSGSYRSRIKSEKIGAQIAEANLQQNRLLLSTQYQQELQ
QYRKYQQAAGYYTTAGLKQADEQLRIAQVSFKLGEIGYIEYIQNISAAIQTHLSYLETLG
RLDQSAIQLQFYQGQ