Protein Info for ABZR88_RS18615 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 766 PF08267: Meth_synt_1" amino acids 3 to 318 (316 residues), 389.4 bits, see alignment E=1.6e-120 TIGR01371: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase" amino acids 6 to 760 (755 residues), 1094.9 bits, see alignment E=0 PF01717: Meth_synt_2" amino acids 434 to 756 (323 residues), 518 bits, see alignment E=1.1e-159

Best Hits

Swiss-Prot: 62% identical to METE_CYTH3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (metE) from Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)

KEGG orthology group: K00549, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC: 2.1.1.14] (inferred from 76% identity to phe:Phep_3138)

Predicted SEED Role

"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)" in subsystem Methionine Biosynthesis (EC 2.1.1.14)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.1.1.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (766 amino acids)

>ABZR88_RS18615 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MLTQNLGYPRIGSQRQLKKACEQYWAGNISLKELNATARKIREENWQLQVDAGMALIPCN
DFSFYDQVLDMSMLLGAIPSRYAPVLSQNKNNHETDLYFAMARGYQKDGLDIKAMEMTKW
FDTNYHYIVPEFTAKQEFRIFSEKLFGEFNAAQQFCGDAAKPVLIGPASYLLLGKEKEVG
FERIDLIKKLVPVYVEIINRLKTLGAKWVQLDEPCLVLDLSAKEKEALVYTHQAIANRVS
GIKILVATYFGALQDNTPLAVNLPVAALHIDLVRAPEQLDEMLKQLPDRLQLSLGVIDGR
NIWKNDYEKSLALINKAVAAIGAERVLIAPSCSLLHVPCDLELETELDYGTKNWLAFARQ
KLGELKDLAAIFEGDTALLAANKQSIEARRNSTQIHKPAVKERAAALTAQDAERLHTFAI
RREVQRERFNLPLFPTTTIGSFPQTDDIRKLRATFKKGELSLNAYEKAIEEATIAAIRWQ
EDVGLDVLVHGEFERNDMVEYFGERLDGFLFTKNGWVQSYGSRCVKPPVIYGDVSRPRDM
TVRWTTFAAAQTERHMKGMLTGPVTILQWSFVRDDQPRETTTNQIALAIRDEVVALEQAG
IGIIQIDEPAIREGLPLRKADWPQYLDWAVKAFRISASGVQDDTQIHTHMCYSEFNDIIA
HIAAMDADVITIETSRSQMDLLEAFAGFKYPNEIGPGVYDIHSPRIPTTQEMVDLLQKAA
QLLPAQNLWVNPDCGLKTRKWPETKAALENMIAAAQTARQLIEVEA