Protein Info for ABZR88_RS18615 in Mucilaginibacter yixingensis YX-36 DSM 26809
Annotation: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 62% identical to METE_CYTH3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (metE) from Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
KEGG orthology group: K00549, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC: 2.1.1.14] (inferred from 76% identity to phe:Phep_3138)Predicted SEED Role
"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)" in subsystem Methionine Biosynthesis (EC 2.1.1.14)
MetaCyc Pathways
- superpathway of L-methionine biosynthesis (by sulfhydrylation) (12/12 steps found)
- aspartate superpathway (21/25 steps found)
- superpathway of L-lysine, L-threonine and L-methionine biosynthesis II (13/15 steps found)
- L-methionine biosynthesis III (4/4 steps found)
- superpathway of L-lysine, L-threonine and L-methionine biosynthesis I (14/18 steps found)
- S-adenosyl-L-methionine salvage II (3/3 steps found)
- L-methionine biosynthesis II (5/6 steps found)
- superpathway of S-adenosyl-L-methionine biosynthesis (7/9 steps found)
- superpathway of L-methionine biosynthesis (transsulfuration) (7/9 steps found)
- superpathway of L-homoserine and L-methionine biosynthesis (6/8 steps found)
- L-methionine biosynthesis I (3/5 steps found)
- seleno-amino acid biosynthesis (plants) (3/5 steps found)
- S-adenosyl-L-methionine salvage I (2/4 steps found)
- superpathway of seleno-compound metabolism (6/19 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.1.1.14
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (766 amino acids)
>ABZR88_RS18615 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (Mucilaginibacter yixingensis YX-36 DSM 26809) MLTQNLGYPRIGSQRQLKKACEQYWAGNISLKELNATARKIREENWQLQVDAGMALIPCN DFSFYDQVLDMSMLLGAIPSRYAPVLSQNKNNHETDLYFAMARGYQKDGLDIKAMEMTKW FDTNYHYIVPEFTAKQEFRIFSEKLFGEFNAAQQFCGDAAKPVLIGPASYLLLGKEKEVG FERIDLIKKLVPVYVEIINRLKTLGAKWVQLDEPCLVLDLSAKEKEALVYTHQAIANRVS GIKILVATYFGALQDNTPLAVNLPVAALHIDLVRAPEQLDEMLKQLPDRLQLSLGVIDGR NIWKNDYEKSLALINKAVAAIGAERVLIAPSCSLLHVPCDLELETELDYGTKNWLAFARQ KLGELKDLAAIFEGDTALLAANKQSIEARRNSTQIHKPAVKERAAALTAQDAERLHTFAI RREVQRERFNLPLFPTTTIGSFPQTDDIRKLRATFKKGELSLNAYEKAIEEATIAAIRWQ EDVGLDVLVHGEFERNDMVEYFGERLDGFLFTKNGWVQSYGSRCVKPPVIYGDVSRPRDM TVRWTTFAAAQTERHMKGMLTGPVTILQWSFVRDDQPRETTTNQIALAIRDEVVALEQAG IGIIQIDEPAIREGLPLRKADWPQYLDWAVKAFRISASGVQDDTQIHTHMCYSEFNDIIA HIAAMDADVITIETSRSQMDLLEAFAGFKYPNEIGPGVYDIHSPRIPTTQEMVDLLQKAA QLLPAQNLWVNPDCGLKTRKWPETKAALENMIAAAQTARQLIEVEA