Protein Info for ABZR88_RS17280 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycoside hydrolase family 3 N-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00933: Glyco_hydro_3
  • amino acids 49 to 362 (314 residues), 236.7 bits, E=2.4e-74

Best Hits

KEGG orthology group: None (inferred from 60% identity to phe:Phep_4183)

Predicted SEED Role

"Beta-hexosaminidase (EC 3.2.1.52)" in subsystem Chitin and N-acetylglucosamine utilization or N-Acetyl-Galactosamine and Galactosamine Utilization (EC 3.2.1.52)

MetaCyc Pathways

• chitin degradation II (Vibrio) (3/6 steps found)
• chitin degradation III (Serratia) (3/7 steps found)
• peptidoglycan recycling I (8/14 steps found)
• peptidoglycan recycling II (3/10 steps found)

KEGG Metabolic Maps

• Aminosugars metabolism
• Glycosaminoglycan degradation
• Glycosphingolipid biosynthesis - ganglio series
• Glycosphingolipid biosynthesis - globo series
• Nucleotide sugars metabolism
• Other glycan degradation

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.52

Use Curated BLAST to search for 3.2.1.52

Protein Sequence (575 amino acids)

>ABZR88_RS17280 glycoside hydrolase family 3 N-terminal domain-containing protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MKKFATAVLLLLFNLLVLNVFAQRQGYITTLDEQNHWVDSVFNKLSRKRKVEQLFFVRAH
TNRGRAYEDSVGKVIAKEQVGGLVFFQGGPGRQLNLTNNYQKLAHIPLLIAMDGEWGLGM
RLDSTISYPYQMTLGAIQDTALIYKMGQYVAYDFKRIGAQMNFAPDMDVNNNPNNPVINY
RSFGDNKYNVAQRGIAYMHGMQLGGLLTTAKHFPGHGDTETDSHLDLPQLNFNRARLDSL
EEYPFRQAIAAGISGVMVAHMNIPALDSTKNLPSTLSRPIITGELKDSLKFRGLIVSDAM
EMKGVTKYFPNGEADVRAFIAGNDILELSENSCRAVKMIKKAIRQGKIAPEELDAKVRKV
LAAKYWAGLAIYKPANPTGLAQDLNRPDALALQQQLADKAVTLLRGDSVIRNLSPLKRTA
LVSIGTSGVTVYQQELAKVFMPCKEFMIGKEVQMPEMRAILNQLKGFDQIIVGIHDTRAR
PASKLDYSSNLKLMIAELASYRNVVISVFANPYTIAGLPGIEKSGALLACYQKEDFMQRA
AAKVICGQINAEGKLPVSVNAFFPNGAGIVVEPAL