Protein Info for ABZR88_RS16005 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: AAA family ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 719 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 454 to 478 (25 residues), see Phobius details PF13614: AAA_31" amino acids 544 to 699 (156 residues), 42 bits, see alignment E=1e-14

Best Hits

KEGG orthology group: None (inferred from 40% identity to psn:Pedsa_1035)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (719 amino acids)

>ABZR88_RS16005 AAA family ATPase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MEVKDFFKLLKKYISILIIVPAVAIMVTFFLVRNLPDEYVSNSRIATGIVDQTRQLLDQN
ETNVQDTKIYTEFSNLMEVMKLKKMYDMVSYNLILHDLNSKTPFRKSSKMMASLTVQQWK
DAVAIFNYKLKHLEGLSLVNPKENSLNKMLIEMRYDERSLSKAITITREDFSDFIIVSAS
SENPQLSAYIVNTLCQGFIDYHTKIVQQNELAAVRYLSNLLNERRDTLAVKTGKLQNYKI
KNDVLDLEDQSKTVYGQIVEYQNKLIEAQKNMASYTGALDNIDKKFDPKSRKFIEQNVSK
INSQLTTSMDQLHALNDRWVMSNFDPKIKTAIDSLQKKVTNQALQSNDAYILDPLQTKSD
LLRQRLELEMNYNLTKYSLKSIQQQLDNLNANFKRMVPLDAKVKTYQMEIEIASKEYQDV
QNRYNNAVLQSKSETKLMQIEKAEPDVAEPSKKLLLIVLAGVGGEMICLVIFFAMFFLDN
SIKDPVRLANRTSLPVLGYLNRIPGSTIDLRRLWDVEHRDRMQQYKDLLRAIRFEVDQEL
AGEKVVAVTSMRDGEGKTLLASTLAYSYNMINKKVLLIDGNMENPTISHSVQPKVFIEDF
FRNDPSNAPAISQAVGVLGNRGEDVTLLEISSEVFLRNKFTELKQIYDIILIDIPSLSAK
NKAKEWMLFANKVIVVFEADQDIVEGRKQLVKELQQLNTTGKFAGWVLNKAAYQSKKRG