Protein Info for ABZR88_RS15380 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycosyl hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1103 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF17132: Glyco_hydro_106" amino acids 38 to 902 (865 residues), 943.8 bits, see alignment E=8.5e-288

Best Hits

Predicted SEED Role

"putative acetyl xylan esterase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1103 amino acids)

>ABZR88_RS15380 glycosyl hydrolase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MYKKTMLHYAAGVACFIAGASLNARAQTPAEWKQEFMSPPASAKPRTWWHWTQSNITKEG
ITKDLEWMKRSGIAGFMLADVAAGGGQTVDKKLVFGTPEWKDAVHFAASEAERLGLEMSI
FSSPGWSLTGGSWVKPEQAMKKLVWSETRIAGGKAFKGTLPQPPAQEGAGPNLANAPTRP
GAKNFYADCAVIAYRTPADAAVVESQQPTITSASGTADAKVLTDENIMTGITVKTGADKI
AWLQLAYPQQVLARSISIAASRGIPYGRVMASADGKTFHILTTIPGKSGYRGGNIRTYAF
PDTRAQYFRIELTNTPVKPGEVISQATTAVDSAYTLSEIQLHSDGRVNRWEDKAGFNFLF
EYTNTATPEVPQSAEIKAEDEIDLTSKMQPDGTLNWTPPAGNWTVLRFGYALTGSKNRPA
IAAALGYEVDKMSKKHVTAYMDYYSKLVKDATGDLYGKSLQYYMMDSWEAGIQNWTDDMI
SEFKNRRGYDPTKYLPVMAGHIVGSAEESDRFLWDFRRTLVDLIAENHYGTVTDYLNKQG
IKTYGEAGGVSLESIEDALLNKKYVNIPMGEFWVKDLHPSSMYYEDMRGAASASHVYGQN
IVAAESFTGGNYESPATLKRLADYWFSQGLNRLVFHTSAHQPLDTKPGNTMVGTHINRNI
TWAEDALPFTTHLARCSYLLQKGKYVADVAYLLKEGAPSTMPFWGAGLQPAMPDGYQFDY
LNTDAFLNLLTVDANGRLNLPSGMSYAVLVLPPTQKMSLPVLRKIKQLVEAGATIVGPKP
ISAPGLSAGADGDTELNDLSYQLWADLDGNSRTKRTFGKGRVYWNQPLKDVMADLAIPRD
AAIERLPDEIAWTHRRDGDNDIYYVVNRTDTLQNFDITFRTGSKDVNLWNPDNGTVTPSA
YTLTGNLTRVPMHLEPGQNMFVIFSGKAPMASRSVPVKTMSVLATLSGPWQLSFPPKWGA
PESVQLANLSDWTTNTDEGIKYFGGTATYTKTIAIKPNWLNPGAAIWLDLGKVGDLAEVW
LNGKRVDLAWYAPYRVDISKALKPGNNQLQIKVTNEWTNRLIGDKANPDKKVLANYVMPF
GGMYKMQPSGLMGPVRLISPLAP