Protein Info for ABZR88_RS14330 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 266 PF04488: Gly_transf_sug" amino acids 70 to 108 (39 residues), 24.3 bits, see alignment 6.2e-09 PF05704: Caps_synth" amino acids 76 to 146 (71 residues), 24.7 bits, see alignment E=2.2e-09 PF04572: Gb3_synth" amino acids 136 to 263 (128 residues), 26.8 bits, see alignment E=7.5e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (266 amino acids)

>ABZR88_RS14330 glycosyltransferase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MATDSNSIVQSLWIGGQLSKVEQLCIQSFLDHGHEFHLYAYEDIKNAPARTQVIDASNIM
PASSIFRYKAGWAKGSVSGFADVFRVMMVLKNGGWWVDMDMICLKKLDFKNDFVICSSYE
GEYDQLVNNCIFKCPQQHPFLQYCLDEIKKIDLENMDFGLAGPFLFQRAIKNLGLEEQVS
PYQIFNPIAWKNVSELVLGQLSPANKIKEQLRPIFKPATMPGRKISDSSYTVHFWNEVWK
NCNLDKNGTYGSSSLFEKLKRKHGIS