Protein Info for ABZR88_RS05905 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 439 transmembrane" amino acids 12 to 38 (27 residues), see Phobius details amino acids 64 to 83 (20 residues), see Phobius details amino acids 93 to 111 (19 residues), see Phobius details amino acids 117 to 137 (21 residues), see Phobius details amino acids 158 to 177 (20 residues), see Phobius details amino acids 188 to 207 (20 residues), see Phobius details amino acids 250 to 271 (22 residues), see Phobius details amino acids 283 to 304 (22 residues), see Phobius details amino acids 313 to 331 (19 residues), see Phobius details amino acids 337 to 355 (19 residues), see Phobius details amino acids 375 to 394 (20 residues), see Phobius details amino acids 406 to 425 (20 residues), see Phobius details PF11700: ATG22" amino acids 7 to 430 (424 residues), 211.4 bits, see alignment E=2.3e-66 PF07690: MFS_1" amino acids 53 to 371 (319 residues), 46.2 bits, see alignment E=3.1e-16

Best Hits

KEGG orthology group: K06902, MFS transporter, UMF1 family (inferred from 65% identity to phe:Phep_1904)

Predicted SEED Role

"FIG00909100: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (439 amino acids)

>ABZR88_RS05905 MFS transporter (Mucilaginibacter yixingensis YX-36 DSM 26809)
MENKNNPKTIRAWAFFDWANSAYNLVITSTIFPAYYVAVTKNPANGDRVNFFGHSFINTA
LSNYAYAFAYLVMALLLPILSSIADYRGNKKNFMKAFTWMGAAACICLFWFDKSNVSFGI
ICSAVAAIGYSGGFVFYNSYLPQIATVDMQDKVSAKGFTYGYVGSVILQIICLVFVLQPK
WFGINGGTAAQISFLLVGLWWAGFSQIPFTVLPKGEPNGKGNKYGILKGGFIELGQVWKK
VMHMPLLKRFLPAFFFYSMGVQTIMLVAAGFGAKVLNMPTSGLIEIILIIQLVAIGGATL
MSYLSGIFGNIKVLAGVVVIWIGACVGAYFITTIPQFYGLAIVVGLIMGGIQSLSRSTYS
KYLPQDIPDTASYFSFYDVTEKLAIVGGMASFAFIEEFTGSMRNSALALCGFFILGLLLL
ISLLATEKKLRKNSDFSGV