Protein Info for ABZR88_RS03520 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: class I SAM-dependent methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 210 PF01209: Ubie_methyltran" amino acids 13 to 143 (131 residues), 29.4 bits, see alignment E=1.6e-10 PF13489: Methyltransf_23" amino acids 26 to 189 (164 residues), 46.5 bits, see alignment E=1e-15 PF13847: Methyltransf_31" amino acids 38 to 144 (107 residues), 33.2 bits, see alignment E=1.2e-11 PF13649: Methyltransf_25" amino acids 41 to 136 (96 residues), 51.9 bits, see alignment E=3e-17 PF08242: Methyltransf_12" amino acids 43 to 137 (95 residues), 51.2 bits, see alignment E=5.1e-17 PF08241: Methyltransf_11" amino acids 44 to 137 (94 residues), 40 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: None (inferred from 42% identity to dfe:Dfer_2850)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (210 amino acids)

>ABZR88_RS03520 class I SAM-dependent methyltransferase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MASDYSNAAWFYDNLSRVVFGQALVRAQTRFLSAIPAGANVLIAGGGTGKLLESIAAVHP
QRLKITYAEISSKMIARARQRNAGQNEVTFVNDAVEHVAGQEVFDVVITPFLLDSLNPVI
FPQVFNHMHQLLKPGGIWLNTDFQLTGKWWQKPLLKSMYFFFRLMGCTDTISLPQIANQF
RQLDYDVVKEKGFYGDFILASVYEKQKIVI