Protein Info for ABZR88_RS03160 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycoside hydrolase family 3 C-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00933: Glyco_hydro_3
  • amino acids 95 to 319 (225 residues), 137.1 bits, E=1.5e-43
• PF01915: Glyco_hydro_3_C
  • amino acids 351 to 601 (251 residues), 182.5 bits, E=1.5e-57
• PF14310: Fn3-like
  • amino acids 638 to 708 (71 residues), 85.5 bits, E=3.4e-28

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

• cellulose degradation II (fungi) (2/3 steps found)
• neolinustatin bioactivation (2/3 steps found)
• linamarin degradation (1/2 steps found)
• lotaustralin degradation (1/2 steps found)
• linustatin bioactivation (2/4 steps found)
• coumarin biosynthesis (via 2-coumarate) (2/5 steps found)
• α-tomatine degradation (1/6 steps found)
• firefly bioluminescence (2/14 steps found)

KEGG Metabolic Maps

• Cyanoamino acid metabolism
• Phenylpropanoid biosynthesis
• Starch and sucrose metabolism

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Protein Sequence (720 amino acids)

>ABZR88_RS03160 glycoside hydrolase family 3 C-terminal domain-containing protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MKIKLLNLSALGFALLLGLPVAQAQQTDKQTDAKIKRLLKQLTLDEKITMLHADSKFGTG
AVPRLHIPALLTDDGPLGVREEVDDHWAPRKLTTDSATFFPNGSAIAATWNPALALRYGQ
DLGEESRARKKDVILAPAFNIARTPLNGRTYEYLSEDPVLNSTLAVQTVKGIQQWHVAAC
IKHYAVNNQETDRYKVSAELSERALREIYLPAFKAAVEQADAWSLMSAYNKVRGSYCAEN
SYLLNDILKKEWGFKGVVISDWGGVHSTVNSALNGLDIEMGSPGSYDKYFFAAPLKTAVQ
EGIVPVKVIDDKIYRILNLLYHTALAADTKKPQLNSPAHYKTAYDIASESVVLLKKDARL
LPLNLSSVKNIAVIGDNAVHHFALEGYGAGVKAKYEVDVLQGLKNRLPSVNITFARGYNG
NYKANAPDSVKAASNRPNAKLIAEAVAMASKANLVILCIGGNRSYETENTDRKDLSIPFG
GQELADAVLAANPNTIVVFTGGAPYDLGKLKQQAPALLWDWYNGSEHGNALADVLLGRVN
PSGKLPFTFPASLDDSPAHALHTYPGNNDIAEYKEGILVGYRWFDTKKIDPLYCFGYGLS
YTTFSLSNFTTDKVSYTSNDVITASVTLNNTGKSSGKEVVQLYVHKDGSAVERPEQELKA
FQKVLVPAGKSIKVSLKLKASDLAYYNEKDKKWTVEPGKYVLMAGTSSRDLEGKVTVSVR