Protein Info for ABZR88_RS01035 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: DUF6298 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 983 PF19815: DUF6298" amino acids 414 to 901 (488 residues), 790.4 bits, see alignment E=3.4e-242

Best Hits

KEGG orthology group: None (inferred from 59% identity to phe:Phep_2787)

Predicted SEED Role

"FIG00654134: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (983 amino acids)

>ABZR88_RS01035 DUF6298 domain-containing protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MASEKAIPDAPVKVVVPVKPGDATLRIQSALDYVATLPADANGIRGAVLLDKGTYQVNGS
LKINAAGVVLRGSGMGTDGTVLVGAGLDRATLIQVAGKDDRRKASEVKISDGYVPVNALT
FHVASANGLKAGDNISIRRPSTQKWIETLGTVTFGGGLSALGWKPGEHDLHFDRKVVAVN
GNEVTIDAPLTTALDTAFGGGFVARYDWPGRISQVGVENLCLNSVYDAANPKDEAHRWMA
ITMASVSDAWVRQVTFMHFAASAVFVLETGNRITVQDCRSLAPVSEIGGQRRNTFWTMGG
QTLFQRLYSDEGFHDYATGFCAPGPNAFVQCQATRSYSFSGAIDSWASGVLFDVVSIDGK
PLSYKNREQDGQGAGWAAANSTFWNCTASRIDCYKPPTAQNWSFGSWAQFGGDGYWEESN
SSINPRSFYYAQLANRLGKDVSKQAAILMIASEPSSSPTIEQAAELMKQARMKATTVNDW
IGSAPTRDPISVAAGGAKTIDQIGVKAPVAPALAPKMQVLNGWLVRGNTVLQGRHFEAPW
WNGTVHPDYIDKTAKPDVTRWVPGRTGTGLTDDLTAVADWMQASHTIALAHNYGLWYDRR
RDDHERIHREDGDVWPPFYEMPFARSGKETAYDGLSKYDLTKYNPWYWSRLKQFADLADE
RGFVLIHQNYFQHNIIEAGAHYTDFTWRTANNINGTGFPEPVNYAGDKRQFMAEQFYDEK
DPARRKYHIAYINKCLDNFVDNNGVIQYISAEYTGPLHFAEFWVETIKAWEAAHKKKEVI
GLSTTKDVQDAILANPALAPTINVINIEYWYYEGSGKLYAPIGGQSLAPRQQERIFHPKA
SNFEQVYRAVHDYTTKYPDKAVIYNADGFEHFGWAVFIAGGSLPVLPAATDKQFLSDASG
MKPVELPGAPKNQWAIGNTKGMIVYASGGEAVKLNLANGTNYTAKWIEPRTGAATTAEQV
KGGSGVEIKPARSGDAVLWLTRN