Protein Info for ABZR88_RS00855 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: glycoside hydrolase family 127 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 909 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF07944: Glyco_hydro_127" amino acids 273 to 664 (392 residues), 229.9 bits, see alignment E=7.9e-72 PF20736: Glyco_hydro127M" amino acids 679 to 786 (108 residues), 74.5 bits, see alignment E=9.2e-25 PF20737: Glyco_hydro127C" amino acids 789 to 870 (82 residues), 34.4 bits, see alignment E=2.2e-12

Best Hits

KEGG orthology group: K09955, hypothetical protein (inferred from 63% identity to aex:Astex_2581)

Predicted SEED Role

"Putative glycosyl hydrolase of unknown function (DUF1680)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (909 amino acids)

>ABZR88_RS00855 glycoside hydrolase family 127 protein (Mucilaginibacter yixingensis YX-36 DSM 26809)
MRRFTSFAFLLMCVCGGVATAQQPDRPNLAIIATPSGSGGELLRLNDGVMPSGNRTPAGN
RRQQPRLGTQWVQYDWKQPVAVKEIATYWHSVDGGVPMPKAYHILYWDGSAFVPVKNASA
LGLQNNQLNKTAFEEIKTNRMRLEVDSTDRGVTPLQEWIVYQTEGTAYPAVITAGIDRDV
MLNGKTYLAGVVKSSTPVQQVKWEKVSGPGSVAFSSATDKTGSATFSAPGNYVLSLTAGS
GNLASSSTLKVRVATPPPAKRLDVVYTRRYKIDSKLWNDRAKAMIVNWIPFCVDQCERTD
LATGQGGLDNFIEAAKALRGEPHGKHKGYVFSNAWVHQTVESMCEALMVDPQGDPEMIAA
QQEMQQTLDRWIPIILSAQEPDGYLQTAWTLRDTSRWHQRWSPTESRGNHEGYTAGYFIE
SAINHYTLTGGKDKRLYNAAKKLADCWVANIGPGKKTWYDGHQEMEQALVRFGRFVNDME
GHQSHGDSYIKLAKFLLDSRGGGSEYDQSHVPVQQQYEAVGHAVRATYNYSGMADVAAET
GDVDYQSAVMSLWDNMVNKKYYITGGIGSGETSEGFGGNYSLRNNAYCESCSSCGLIFFE
YKMNIAYHDAKYADLYEETMYNALLGSLSLDGKDFTYTNALATAQPRYEWHACPCCVGNI
PRTLLMMPTWTYVLGDDGLYVNLFVGSTIRVDKIAGTDVEMVQKTDYPWSGKVNITVNPD
QSRAFTVYVRVPNRATSTLYSAVPQVKGLKSISVNGRVFTPKITNGYAAIKRVWKKGDHI
DVELPMEIQRVTADERVAADKGKMALRYGPLIYNVEAADQDISKTISNKPLSLKWQPDFL
HGVMTINGTWADGSPLLAVPNYARMNRVATTATPQAEQVLAPTRPNEPPSYVERGPVSTV
WINSKAENK