Protein Info for ABZR88_RS00280 in Mucilaginibacter yixingensis YX-36 DSM 26809

Annotation: Gfo/Idh/MocA family oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 338 PF01408: GFO_IDH_MocA" amino acids 9 to 121 (113 residues), 79 bits, see alignment E=4.9e-26 PF02894: GFO_IDH_MocA_C" amino acids 134 to 338 (205 residues), 62.2 bits, see alignment E=6.5e-21

Best Hits

Swiss-Prot: 37% identical to YBQ3_SCHPO: Uncharacterized oxidoreductase C115.03 (SPBC115.03) from Schizosaccharomyces pombe (strain 972 / ATCC 24843)

KEGG orthology group: None (inferred from 58% identity to shg:Sph21_3167)

MetaCyc: 33% identical to scyllo-inositol dehydrogenase (NADP+) (Bacillus subtilis subtilis 168)
RXN-14347 [EC: 1.1.1.371]

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.1.1.371

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (338 amino acids)

>ABZR88_RS00280 Gfo/Idh/MocA family oxidoreductase (Mucilaginibacter yixingensis YX-36 DSM 26809)
MSSPIVTGILSYGMSGRLFQSPFVNAHPGFKFKAVVERSKKKAAERYPDVISYDSVDELL
ADKEIELVIVNTPGYTHFDFAMQSLKAGKNVLIEKPASGTVEQVKALYDEARARNLNVMV
YQNRRWDSDFQSVKQVVESGRLGRLIEAHFRFDRYSPALSPKAFKEDAELGTNGLVYDLG
PHLLDQVISLFGRPLSFNKQVGINREDSTVIDYFSIQLSYPNQLNVFVTSSLLVAQPLPS
FVVHGTLGSYIKERCDVQEEQLDKEVLPDYEAYGIEPAGSEGVLITIGPDKQKITEHIAS
TKGNYMHLFDAVYHTIRNGALYPITEEHVAWQMEIIEA