Protein Info for ABIE41_RS23420 in Bosea sp. OAE506

Annotation: Mrp/NBP35 family ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 377 PF01883: FeS_assembly_P" amino acids 6 to 76 (71 residues), 52.5 bits, see alignment E=1.7e-17 PF10609: ParA" amino acids 117 to 360 (244 residues), 349.8 bits, see alignment E=2.7e-108 PF13614: AAA_31" amino acids 119 to 157 (39 residues), 36.9 bits, see alignment 1.3e-12 PF09140: MipZ" amino acids 120 to 167 (48 residues), 29.2 bits, see alignment 2.1e-10 PF01656: CbiA" amino acids 121 to 331 (211 residues), 49.3 bits, see alignment E=1.7e-16

Best Hits

KEGG orthology group: K03593, ATP-binding protein involved in chromosome partitioning (inferred from 64% identity to mea:Mex_1p5014)

Predicted SEED Role

"Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (377 amino acids)

>ABIE41_RS23420 Mrp/NBP35 family ATP-binding protein (Bosea sp. OAE506)
MALTQADILRALELVKLPASGQSLSASGRVADILIDGGKVIFAIGIDPTEAAAMEPVRKA
AESAVSGLPGVSQVLVGLTADKAPSSAAAQARQQAQRPTPGAGPGGPTPKAAGVPGVKQI
IAVASGKGGVGKSTTTANLSVALATLGLKVGVLDADIYGPSVPKIFGITGKPRLVSGRTL
APMEAYGLKIMSIGFLIDEETPMIWRGPMVISAITQMLREVAWGELDVLVVDMPPGTGDA
QLTMAQQTPLAGAVIVSTPQDLALLDARRGVAMFKKVEVPILGIVENMSYFICPECGTRS
DIFAHGGARHEAERLGVPFLGEVPLAMPIRETSDSGRPIVASDPDSAHAKAYLAIARQVM
ASMAGGAAKAAPRIVIE