Protein Info for ABIE41_RS22495 in Bosea sp. OAE506

Annotation: glycosyltransferase family 2 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 344 transmembrane" amino acids 247 to 268 (22 residues), see Phobius details amino acids 280 to 305 (26 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 20 to 123 (104 residues), 38.9 bits, see alignment E=9.2e-14 PF00535: Glycos_transf_2" amino acids 23 to 185 (163 residues), 111.1 bits, see alignment E=5.5e-36

Best Hits

Swiss-Prot: 50% identical to Y501_SYNY3: Uncharacterized glycosyltransferase sll0501 (sll0501) from Synechocystis sp. (strain PCC 6803 / Kazusa)

KEGG orthology group: None (inferred from 60% identity to msl:Msil_0373)

MetaCyc: 42% identical to undecaprenyl phosphate-N-acetyl-alpha-D-glucosamine transferase (Staphylococcus aureus)
2.4.2.-

Predicted SEED Role

"Glycosyltransferase"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (344 amino acids)

>ABIE41_RS22495 glycosyltransferase family 2 protein (Bosea sp. OAE506)
MSETQPLSASPPTRGHSSRPELSVVVPVYNEAESLPLLLERLKQVLDGAVTSWELVCVDD
GSRDGTLAVLRLLAAQDRRVSAVSFSRNFGKEIAIAAGLDHASGDAVVIMDADLQHPPET
ILLFLDKWREGYLNIYGQRSDRDGETPLKRNFAKAFYRLFARFGETELPEGAGDFRLLDR
KVVDALRALPERARFSKGLYAWVGFRSTGVTFDVAEREHGVSKFRYRTLFSFAFDGLSSF
STVPLKIATWAGVVIALMAALTALFFLLRTLFFGTDLPGFPSLIVSIMFFSGIQLVSLGM
IGEYVGRIFAEVKRRPLYLIGERVGFDARTVDHPRGDALPPLIR