Protein Info for ABIE41_RS18760 in Bosea sp. OAE506

Annotation: flotillin family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 968 transmembrane" amino acids 6 to 31 (26 residues), see Phobius details amino acids 43 to 62 (20 residues), see Phobius details PF01145: Band_7" amino acids 42 to 193 (152 residues), 66.8 bits, see alignment E=2.7e-22 PF15975: Flot" amino acids 793 to 913 (121 residues), 116.2 bits, see alignment E=1e-37

Best Hits

KEGG orthology group: None (inferred from 64% identity to bja:bll3380)

Predicted SEED Role

"Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)" in subsystem Bacterial Cell Division or Two cell division clusters relating to chromosome partitioning or Universal GTPases (TC 3.A.5.1.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (968 amino acids)

>ABIE41_RS18760 flotillin family protein (Bosea sp. OAE506)
MTGQLIGSLILWLIVAVIIIAIVVYLVNWLYRRSSKEVSFVRTGLFGERVVINGGAFVLP
IIHDVTPVNMNVLQLAVTRASNDALITRDRMRVDIDAEFYVRVKPERDSVAIAAATLGRR
TLQPDQLHALLSGKFISALRTVASEMTMEEMHEQRGMYVQRVKEAAAEALDQNGLLLESV
ALTDLDQTDLQYFNPSNRFDAAGLTRIIEEIEDKRKLRNDIEQESMIRIRTRNLEAERQA
LDLERESEAARLEQQREIEIKRAVQRAEVARERAARDTEAEQAQILSREAIEKSRISNER
AISEARIASDRDIRQQEIARTQAVEEAEIASRELIEKARIANEQAISAARIASERDIRQK
EIERAQTLEAAEIAAREATEKARILQETAISAERIIREQEIRNREIERTRILDQEDIAAR
EAVDTARIGQEERVRALSIARNRALDEAEIAAREAVEKARIAQENVLTAERIALDQRKRL
LEIEQTETIEAAEISAREAVEQARISQERVVASARIRRDEEVRNLEIARNQAIDTAEIAA
REATEAARIAQEKVVAAERIAAELATKELEIRRNADLDTAELKRRDAVERQRIATELKLD
EERINSAKSREMLQIAQKKAVEVAEEDRAIVLAAKRVERTDADSALRQAEITAKQQVESV
DIVREQALEAARIERRRALEQLEIARTQALQEAQIASNEEVERARISSDRGLDEARVGRQ
RELRKLEIARERDVEAAAMDKAIALYTKSLEESAAQASAESARAKAVEAEEQVKTIRESE
GARRRKTVEVLLAEKAAEESNIAAAADKVRRTVEAEAQKLLYEAENVLSDGARYGLFRRR
LLDKIEGIVRESVKPMEKIEGIRILHVDGLAGGGGPGGAGGAARSPTDEVIESALRYRVQ
APMIDQVLKEIGIEGGNLAKMGGLMREASDMQRVAKDAQPAKPKSGGDAKSGGGGEAPAP
DAGPGKTS