Protein Info for ABIE41_RS17870 in Bosea sp. OAE506

Annotation: biotin--[acetyl-CoA-carboxylase] ligase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 258 TIGR00121: biotin--[acetyl-CoA-carboxylase] ligase" amino acids 14 to 245 (232 residues), 121.8 bits, see alignment E=1.7e-39 PF03099: BPL_LplA_LipB" amino acids 36 to 142 (107 residues), 54 bits, see alignment E=1.7e-18 PF02237: BPL_C" amino acids 203 to 249 (47 residues), 32.8 bits, see alignment 5.4e-12

Best Hits

KEGG orthology group: K03524, BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC: 6.3.4.15] (inferred from 48% identity to msl:Msil_2932)

Predicted SEED Role

"Biotin--protein ligase (EC 6.3.4.9, EC 6.3.4.10, EC 6.3.4.11, EC 6.3.4.15)"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.4.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (258 amino acids)

>ABIE41_RS17870 biotin--[acetyl-CoA-carboxylase] ligase (Bosea sp. OAE506)
MLPEAARAAGYRLIIRDEVGSTMEEARRALHQGDPGLLWIVARSQNAGRGRHGRQWTSPP
GNLYASLLLVNPCEPALAPQLGFVAGLALHDAAARVTGLAAPRLALKWPNDLLVDGAKCS
GLLLEGESGAGRFAVIAGLGINIASCAQGTPYPASFLRAHAPDVTIEATLAALAEAFAER
FAIWRQAGGFGPIRQAWLVRAAFLGETITIRPPAGAVTGIFAGLDPGGRLLLETSAATQA
FDAGDLFFGAAAPEETTR