Protein Info for ABIE41_RS17780 in Bosea sp. OAE506

Annotation: DUF2232 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 319 transmembrane" amino acids 6 to 33 (28 residues), see Phobius details amino acids 39 to 65 (27 residues), see Phobius details amino acids 70 to 90 (21 residues), see Phobius details amino acids 102 to 125 (24 residues), see Phobius details amino acids 175 to 196 (22 residues), see Phobius details amino acids 217 to 235 (19 residues), see Phobius details amino acids 241 to 263 (23 residues), see Phobius details amino acids 275 to 299 (25 residues), see Phobius details PF09991: DUF2232" amino acids 12 to 302 (291 residues), 28.9 bits, see alignment E=3.5e-11

Best Hits

KEGG orthology group: None (inferred from 46% identity to met:M446_2592)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (319 amino acids)

>ABIE41_RS17780 DUF2232 domain-containing protein (Bosea sp. OAE506)
MIPAVGIGAGLVAALLFSVVITGSPLAVLLYSAAPLPIFIAALGWNHRAGLFACAAGALA
VSLGLSLPAGFAFACIIALPAWWIAYLALLARSDESGAVEWYPLGHLMIWIAGTATLASV
ASALVMTTDFETYRAVIGRIVDNLLAEMVRSRMLTLPQGTTVAELSANITPLLVRAVPLG
IAASVVTTITANLWLAGKAVQFSGRLPRPWPFIPATTLPRTALPLLAAGLVTALLDGFVG
LAGASLVGALLAAFMFTGLCLLHDLSRGQAWRTPMLISVYVALIVMQAVLTPLLALAGML
DTLLGLRKRAAMPPPPPQA