Protein Info for ABIE41_RS16165 in Bosea sp. OAE506

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 144 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 34 to 52 (19 residues), see Phobius details amino acids 92 to 116 (25 residues), see Phobius details amino acids 126 to 131 (6 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (144 amino acids)

>ABIE41_RS16165 hypothetical protein (Bosea sp. OAE506)
MPPPRDREKQVLIVLGAATLIGLAWLGWLLLGGLGVALLGLLVLFVAIRVELEGDRPVGT
QSTPEAYAQHFRTESSQPQAERARRRTEIASVVSTARLFAIAGAILTTSGFALLFSGFGQ
GSLPDLFWVLADISISLFQKGKHW