Protein Info for ABIE41_RS15350 in Bosea sp. OAE506

Annotation: sulfate ABC transporter permease subunit CysW

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 302 transmembrane" amino acids 35 to 60 (26 residues), see Phobius details amino acids 81 to 108 (28 residues), see Phobius details amino acids 119 to 146 (28 residues), see Phobius details amino acids 156 to 178 (23 residues), see Phobius details amino acids 219 to 242 (24 residues), see Phobius details amino acids 262 to 284 (23 residues), see Phobius details TIGR02140: sulfate ABC transporter, permease protein CysW" amino acids 34 to 292 (259 residues), 388.7 bits, see alignment E=1.4e-120 TIGR00969: sulfate ABC transporter, permease protein" amino acids 36 to 291 (256 residues), 308.8 bits, see alignment E=3.4e-96 PF00528: BPD_transp_1" amino acids 97 to 291 (195 residues), 37.7 bits, see alignment E=9.5e-14

Best Hits

Swiss-Prot: 54% identical to CYSW_SYNE7: Sulfate transport system permease protein CysW (cysW) from Synechococcus elongatus (strain PCC 7942)

KEGG orthology group: K02047, sulfate transport system permease protein (inferred from 73% identity to avi:Avi_5391)

MetaCyc: 48% identical to sulfate/thiosulfate ABC transporter inner membrane subunit CysW (Escherichia coli K-12 substr. MG1655)
ABC-19-RXN [EC: 7.3.2.5]; ABC-7-RXN [EC: 7.3.2.5, 7.3.2.3]; 7.3.2.3 [EC: 7.3.2.5, 7.3.2.3]; TRANS-RXN0-478 [EC: 7.3.2.5, 7.3.2.3]; TRANS-RXN0-479 [EC: 7.3.2.5, 7.3.2.3]

Predicted SEED Role

"Sulfate transport system permease protein CysW" in subsystem Cysteine Biosynthesis

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.3.2.3 or 7.3.2.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (302 amino acids)

>ABIE41_RS15350 sulfate ABC transporter permease subunit CysW (Bosea sp. OAE506)
MFDATLPRAALAPSSPTPAPAQNRQRIGGESPWVQSLLIGVSLAFLLLFLLLPLLTVFVE
AGARGWAAWRAAISEPDAVSAIRLTLLVAAIAVPFNIVVGLAAAWAIAKFEFRGKSLLIS
LIDLPFSVSPVISGLVYVLLFGAQGYLGPFLKANGIEIIFALPGLVLATVFVTFPFVARE
LIPHMQALGSSDEEAALTLGASPWRVFFSITLPNVKWSLLYGVLLCNARAMGEFGAVAVV
SGKIRGLTNTMPLHVEILYNEYMSAAAFSVASLLAGLALVTLVLKTILEWRFGDAIAAAR
RH