Protein Info for ABIE41_RS15160 in Bosea sp. OAE506

Annotation: AsmA family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 585 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF05170: AsmA" amino acids 337 to 512 (176 residues), 50.1 bits, see alignment E=2e-17 PF13502: AsmA_2" amino acids 362 to 547 (186 residues), 70.1 bits, see alignment E=2.1e-23

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (585 amino acids)

>ABIE41_RS15160 AsmA family protein (Bosea sp. OAE506)
MTRRASILAYSLVLVLGLLGLQSWNIAAARVERHVIRAIEARTGLAVTGLDKAEIALLPL
PRISLSAVSFAQQDGSLSGRALRLRAQARLLPLLVGRLDFDRVDLVSPQLDLAVPAGSDQ
LGDWLARPLDALQKLSEQSRIVINGGSVFIRSEGAIRSILRDVNLVLDEREAQAPLALAG
NLQWRGMPAEISLVWPMAGGRGRTLLSIEAPLLKLQFEGARSSAPEPITTGQLTLATRSL
PELLNWFGEAPRLAGALGPLSLSAEARIRPHDTALTNVALRLEGDRLDGALNLATVAGRT
SLSGTLAGATLDLGRLLTRLELPAANGTPDSAPLPFETWTAHDIDLRVSVEAARLDGARL
SDVATYLLVKKGRFEAGLLRAGAYGGSVKGRLLAMAAPGGIDVKLVGGVEKLNLGRAGLD
LPQLARLSGTGALQLSLDGLGQSVPEILASLSGKGTLSLRQGELSGFAFADLLRRAERNP
GLALRDWRQGRTAFDSAGFTATVANGVLTLSDAQMAGTGYRMTLVGTAALNGPTLDMAAL
LQPASGTLRVPFSLRGPLSAPAFDLQTEALLRPAGAGEGETLPLR