Protein Info for ABIE41_RS13705 in Bosea sp. OAE506

Annotation: xanthine dehydrogenase family protein molybdopterin-binding subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 787 PF01315: Ald_Xan_dh_C" amino acids 20 to 140 (121 residues), 99.8 bits, see alignment E=1.7e-32 PF02738: MoCoBD_1" amino acids 155 to 404 (250 residues), 271.1 bits, see alignment E=1.1e-84 PF20256: MoCoBD_2" amino acids 429 to 718 (290 residues), 301.3 bits, see alignment E=1.2e-93

Best Hits

KEGG orthology group: None (inferred from 82% identity to mno:Mnod_1750)

Predicted SEED Role

"Carbon monoxide dehydrogenase large chain (EC 1.2.99.2)" in subsystem CO Dehydrogenase (EC 1.2.99.2)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.2.99.2

Use Curated BLAST to search for 1.2.99.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (787 amino acids)

>ABIE41_RS13705 xanthine dehydrogenase family protein molybdopterin-binding subunit (Bosea sp. OAE506)
MTATGIGASVRRKEDHRFITGQGRYTDDINRPGQAHAYFLRSPHAHATIKSIDAKAAAAM
PGVLGIFTGDDLAADKVGGLICGWMIHNKDGSPMRAGAHPALAQGKVRYVGDHVCVIVAE
TLAQARDASEAILVDYEVLPAVVDTASAAGAKTVVHAEAPDNTVFNWHLGNKDETEAAFK
AAKHVTKLDIVNNRLVPNPMEPRAAVGDYDDGEGIFTLYTTSQNPHVARLVLSAFIGIAP
ENKLRVVAPDVGGGFGSKIFIYAEETVCVWAAKKVGRPVKWNSDRTEAFLSDAHGRDHVT
HAELATDADGKITALRVKTTANLGAYLSTFSSSVPTYLYAPLLSGSYDIPAIYAEVDAVY
TNTAPVDAYRGAGRPEATFVVERLVEVAARELGKDPAKFRMQNYVKKFPHQTPVIMMYDA
GNYAASMRKALEIIDYKGLGKRKRESARNGKLRGIGFSSYIEACGIAPSAAVGSLGAGVG
LWESAEVRVNPVGTVEVLTGSHSHGQGHETTFAQLVSGKLGIPIENVSIIHGDTDKVQMG
MGTYGSRSGAVGMSAIFKAVDKVIAKGKKVAAYVLEADEADIDFADGHFSVKGTDRKLDF
GSCALQAYIAHKFNGQDLEPGLKEGAFYDPTNFTFPAGVHICEVEIDPQTGVTKIERWAA
VDDFGNVINPMIVEGQVHGGIAQGVGQALLEGAKYNSDGQLVTASFMDYCMPRADDLPSF
EVGMTVTACPSNPLGIKGCGEAGAIAAPPAVINAITDALGHEEIAMPATPQAVWRAAQKS
ITRMAAE