Protein Info for ABIE41_RS13660 in Bosea sp. OAE506
Annotation: flavin reductase family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 47% identical to RUTF_STAND: FMN reductase (NADH) RutF (rutF) from Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)
KEGG orthology group: K09024, putative flavin reductase RutF [EC: 1.5.1.-] (inferred from 52% identity to bgl:bglu_2g19770)MetaCyc: 38% identical to FAD reductase (NADH) (Cupriavidus pinatubonensis JMP134)
RXN-8506 [EC: 1.5.1.37]
Predicted SEED Role
No annotation
KEGG Metabolic Maps
- Biosynthesis of alkaloids derived from terpenoid and polyketide
- Methane metabolism
- Tryptophan metabolism
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.5.1.- or 1.5.1.37
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (172 amino acids)
>ABIE41_RS13660 flavin reductase family protein (Bosea sp. OAE506) MTDTVSLQPRVAPEAASFRDAMAGVASAVHVVTTLGPAGRVGLTATAVASVSDSPPTVLV CIARPSRTLAVIEAAGLFCINTLPGDALELAEIFASRRGIEGEARFATRNWTTLATGAPV LSEAVAAFDCRLTAIHDVATHRILIGEVLGLGGAVAAPGSSLIYRQRQFQAV