Protein Info for ABIE41_RS13580 in Bosea sp. OAE506

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 44 to 68 (25 residues), see Phobius details amino acids 77 to 98 (22 residues), see Phobius details amino acids 105 to 129 (25 residues), see Phobius details amino acids 135 to 158 (24 residues), see Phobius details amino acids 170 to 192 (23 residues), see Phobius details amino acids 204 to 228 (25 residues), see Phobius details amino acids 234 to 256 (23 residues), see Phobius details amino acids 277 to 302 (26 residues), see Phobius details

Best Hits

KEGG orthology group: K03453, bile acid:Na+ symporter, BASS family (inferred from 37% identity to pgv:SL003B_1591)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (326 amino acids)

>ABIE41_RS13580 hypothetical protein (Bosea sp. OAE506)
MLTRIAASLAAGLAWLGRYGTQGFALSIFLGLALPQFSAAARPLLPVTIFCFTTIVFMRA
DVAIIAGLLRSPGKLSLTCLWMVAAPVVVIGGAFLIVGRDAIDPGLLLGLAILAAAPPIM
SSPAVALIYGFEPSLIIAGVIITTVASPVVAPMLVELLAGAAVPLDRWALTLRLVFFVGG
GMAAAAILRWALGMARIKAMKANLDGFGVLMYFTFAIAAMDGVTNAAFDNPSRVSGFLAC
AFAVSIIGLVVSYLALRFLRRSERFMVGYGAGQRNMGMIVAALGAGVPPSTFLFFALAQF
PIYLMPWLLSGFAGRIRRSEAAADGA