Protein Info for ABIE41_RS13550 in Bosea sp. OAE506

Annotation: S8 family serine peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 918 PF00082: Peptidase_S8" amino acids 34 to 336 (303 residues), 123.4 bits, see alignment E=2.4e-39 PF01483: P_proprotein" amino acids 393 to 476 (84 residues), 66.4 bits, see alignment E=4e-22 PF08548: Peptidase_M10_C" amino acids 512 to 601 (90 residues), 25.4 bits, see alignment E=2.5e-09 PF00353: HemolysinCabind" amino acids 556 to 582 (27 residues), 20.3 bits, see alignment (E = 8.6e-08) amino acids 565 to 599 (35 residues), 28.8 bits, see alignment (E = 1.9e-10) amino acids 645 to 678 (34 residues), 27.8 bits, see alignment (E = 3.9e-10) amino acids 724 to 758 (35 residues), 29.4 bits, see alignment (E = 1.3e-10) amino acids 794 to 828 (35 residues), 31.5 bits, see alignment (E = 2.8e-11) amino acids 820 to 846 (27 residues), 25.4 bits, see alignment (E = 2.3e-09)

Best Hits

Predicted SEED Role

"Alkaline phosphatase (EC 3.1.3.1)" in subsystem Phosphate metabolism (EC 3.1.3.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.1

Use Curated BLAST to search for 3.1.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (918 amino acids)

>ABIE41_RS13550 S8 family serine peptidase (Bosea sp. OAE506)
MASVTGKDPLLVAQWHLKTLLGNDPNKIWSEFDGTGVKVGIYDDGIDKSVKDLQGTYDAG
KELVFGGVRADPSKGSGVHGTAVAGIIGAGANNGVGGVGIAHGASLTSIDIFSGTANYNF
IASIRAMSQFDVTNNSWGWSAKYSDNASVAGSFGKQFIDALAFAADTGRGGKGTIIVNAV
GNDNLSDNRDANTSEYNAARQTITVGAIGQDGDVSAYSTRGASVLVSGPTNGGGAGITTT
DRTVGGYSATDATSSFGGTSAAAPMVTGIVSLMLDASNNTLGWRDVQDILSYTADHTTPA
ALTGGISGRMEYGWTINKADNANGGGLHYSNDVGYGMTDGFEAVRYAEVWSKFGAAEVSA
NEAKASVVGTVNKVIADKATLQFTAVVSQAIEIEHADLTLTLTHANINDLRIELISPEGT
RSIVLDAGTGVNSVANNSWTFGTDALRGELSNGTWTIKITDTKTGAVGSVASYRLDVYGD
APSANDVYHYNDEFFKMLALDPARGTLKDLDGGIDWINASANVDNTVINLNAGQASTWAG
KTAFTIASGTVIENAVTGDGDDTLIGNASANELMGMRGNDVLEGRGGADILDGGTGIDTA
TYVSSTVGVDVDMKRATQVGGDAQGDSFRSIENVTGSAFADVLRGDDTFNFIQGGKSNDV
LEGRGGADILDGGEGIDTATYAFSIVGVDVDMKRATQLGGEAQGDTLKSIENVTGSAFAD
VLRGDDTFNFIQGGKGNDVVEGRGGADILDGGEGIDILSYLNSGGAIQINLATRVMTGND
AAGDVISNFENLQGSRFGDSLRGDAGANVLRGEAGNDTLYGDGGDDLLIGGEGNDTLYGG
NGKDIFQFLKAEGLYGTDVCADFVQGQDRISLVGYGLDYSKLTITSSGSYSSVDFASDGG
TITVMTSARLSSFDFFFL