Protein Info for ABIE41_RS11505 in Bosea sp. OAE506

Annotation: pyridoxamine 5'-phosphate oxidase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 TIGR04025: pyridoxamine 5'-phosphate oxidase, FMN-binding family" amino acids 17 to 211 (195 residues), 258.7 bits, see alignment E=1.2e-81 PF01243: Putative_PNPOx" amino acids 41 to 129 (89 residues), 53.4 bits, see alignment E=1.2e-18

Best Hits

KEGG orthology group: K07006, (no description) (inferred from 66% identity to rpt:Rpal_1894)

Predicted SEED Role

"Phosphohydrolase (MutT/nudix family protein)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (211 amino acids)

>ABIE41_RS11505 pyridoxamine 5'-phosphate oxidase family protein (Bosea sp. OAE506)
MTTESDRAEATIAEPAELRAHMGPVNPLAARKVLDRLDGYCRDFIALSPFLVLATSDGEG
RADASPRGDAPGFVEVVDEHTLFIPDRRGNNRVDSFGNVLASPGVGLIFMVPGIAETLRV
NGRATLTRDPGLLEPATVQERTPTLGLLVAVEEAFFHCGKALIRSKLWEPASRVERSRFP
SLGRIMADQTKAIEVAEAEANLEEAYRTRLY