Protein Info for ABIE41_RS10905 in Bosea sp. OAE506

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 483 transmembrane" amino acids 31 to 53 (23 residues), see Phobius details amino acids 73 to 94 (22 residues), see Phobius details amino acids 103 to 122 (20 residues), see Phobius details amino acids 128 to 147 (20 residues), see Phobius details amino acids 161 to 183 (23 residues), see Phobius details amino acids 194 to 212 (19 residues), see Phobius details amino acids 282 to 305 (24 residues), see Phobius details amino acids 317 to 336 (20 residues), see Phobius details amino acids 347 to 367 (21 residues), see Phobius details amino acids 373 to 396 (24 residues), see Phobius details amino acids 408 to 430 (23 residues), see Phobius details amino acids 442 to 465 (24 residues), see Phobius details PF07690: MFS_1" amino acids 66 to 302 (237 residues), 84.3 bits, see alignment E=8.3e-28 amino acids 288 to 471 (184 residues), 45.2 bits, see alignment E=6.5e-16 PF00083: Sugar_tr" amino acids 69 to 476 (408 residues), 146.9 bits, see alignment E=9.1e-47

Best Hits

KEGG orthology group: None (inferred from 71% identity to rpe:RPE_4551)

Predicted SEED Role

"bll0324; putative sugar transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (483 amino acids)

>ABIE41_RS10905 MFS transporter (Bosea sp. OAE506)
MAEPVPSAGPAPGVIATAIPARLDRLPWSPFHTLVVVALGVTWILDGLEVTLAGSVSGAL
KDSPVLRFSNAEVGMAGAAYLAGAVIGALFFGWLTDRLGRKKLFTLTLLVYLAATAATAF
SWNFWSFIVFRFFTGMGIGGEYTAINSTIQELVPARVRGWVDLVINGSFWIGAALGAVGA
IVLLDPAVIDPEIGWRLAFFIGAALGLIILVLRQWIPESPRWLIGHGRTQEAEAIVAAIE
ARAGVTYDPGERLPLTHLRPRAVTPLREVFHVLFVVHRPRALVGLSLMVAQAFFYNAIFF
TYALILTDFYKVPSQSIGWFILPFAAGNFLGPLILGRLFDTVGRRTMIAATYALSGLLLT
GTGYLFWRDVLTAQQLTLCWSVVFFFASAAASSAYLTVSETFPVEMRALAIAAFYAVGTG
VGGVAGPWLFGALIDTGSRGSVFAGYLLGAALMLAAAVIAARFAIPAERRPLESIARPLN
AAD