Protein Info for ABIE41_RS07700 in Bosea sp. OAE506

Annotation: alpha/beta fold hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 359 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF00561: Abhydrolase_1" amino acids 66 to 213 (148 residues), 60.5 bits, see alignment E=2e-20 PF12697: Abhydrolase_6" amino acids 67 to 325 (259 residues), 35.3 bits, see alignment E=2e-12

Best Hits

KEGG orthology group: K00641, homoserine O-acetyltransferase [EC: 2.3.1.31] (inferred from 66% identity to vap:Vapar_5780)

Predicted SEED Role

"Homoserine O-acetyltransferase (EC 2.3.1.31)" in subsystem Methionine Biosynthesis (EC 2.3.1.31)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.31

Use Curated BLAST to search for 2.3.1.31

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (359 amino acids)

>ABIE41_RS07700 alpha/beta fold hydrolase (Bosea sp. OAE506)
MSSLTGLLRAAVLVASCGLASLAIGADYPAPKRGVWVAKDFRFHTGETLPELKLGYATVG
EPTGEPVVIIHGTAGSAASMLTPIFAGELFGAGQALDASKYFIIIPDAVGAGTSSKPSDG
LRARFPRYHYADMVAAQHRLVSEGLGIRHIRLVLGNSMGGMQTWMWGVSHPDFMDALVPM
ASQPTEMSSRNWMMRRMIIDAVRNDPEWKGGDYTVQPPGFRTANVFFGVATSGGTLAFQH
MAPTREAADKLLDERLKAAFNADANDFLYQWDASRDYNPAPKLEAIKAPVLAINSVDDER
NPPETGIMERELKRLAKARLLLIPASADTRGHGTTGLAKFWAKDLAEWLPTVPRRGGGN