Protein Info for ABIE41_RS06055 in Bosea sp. OAE506

Annotation: DUF3772 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 872 signal peptide" amino acids 1 to 39 (39 residues), see Phobius details transmembrane" amino acids 218 to 236 (19 residues), see Phobius details amino acids 257 to 283 (27 residues), see Phobius details amino acids 297 to 320 (24 residues), see Phobius details amino acids 332 to 353 (22 residues), see Phobius details amino acids 360 to 390 (31 residues), see Phobius details amino acids 421 to 443 (23 residues), see Phobius details amino acids 449 to 466 (18 residues), see Phobius details amino acids 498 to 522 (25 residues), see Phobius details amino acids 537 to 562 (26 residues), see Phobius details amino acids 595 to 615 (21 residues), see Phobius details amino acids 621 to 647 (27 residues), see Phobius details PF12607: DUF3772" amino acids 145 to 201 (57 residues), 48.8 bits, see alignment 7.3e-17 PF00924: MS_channel_2nd" amino acids 636 to 699 (64 residues), 78.2 bits, see alignment 6.4e-26 PF21082: MS_channel_3rd" amino acids 711 to 787 (77 residues), 21.7 bits, see alignment E=3.3e-08

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (872 amino acids)

>ABIE41_RS06055 DUF3772 domain-containing protein (Bosea sp. OAE506)
MAARSGPAPVPRPAPGRGLPLLAAMLLALLLGAVQAFAQQPAVDPSSPRARLDSIRFELT
QIEATLAAPTASEAELQRQRMRLQPSLDQLRQLIEEQTPRVEQAKIRLDQLGPKPDASAP
PESAEVLRERETRLKAFADADETMKIARAAFLQAEQLQTAIGDRRRALFAQALFAAGPSV
LSPDMWGNALSTVPEDLRASGYIFGGWLSGVSDAMSGARGGLVILAFIGAVLLYYLRRRY
LPRFKARFSTTQDRDSLHCLYVALAHVVAGAAPPALASWLIYAALNTAGLLPPRIQPVVA
AVVAGLAVVAFVQALLDALFAPSQPQRRLVSVMDSTASTVVWLGTSLALVLSASKVLEAW
LTAIAAGLAVSIILRSILVVVFAVTLVVGLYRLRDNEEIEEEACLGPYVAVEGASLGPIR
IFGWIVGLALSLAVLSGYVVFASFLTEQVIWIVMVACSVLLTYQLVDQGIPHAMTGKGRL
ALTLKAGLGIRAHTLEKIAVITAGVLKLMLVVIAFLLVMAPWGLESTDFFTSLRAAFFGF
QVGGVTISLSSIIFSGLLFAAGLTATRSMQGWLEVKFLPTTQLDTGLRNSITTAAGYVGY
LAAVALAVSALGLSFERLTLVASALSVGIGFGLQSVVSNFVSGLILLWERPIRVGDQVVV
GDAEGIVKKINVRSTEIATFDRSSVIVPNSNLVSGVVRNRVRNDRTGRILISLSVPRSLD
AGDVRTMLGEVANAHGDVMQKPPPAILFKKIGTSTMDFDLVCVVADVDIVGRVTSDLNFA
LHKRLTEMEPAAGTPELLVKGLEGVEQSLGSIAAAVTREGAAVPARAAAEAKPAPARARR
RPAPPVEEEESEAAPAPPPPAPPEPAKDDSKE