Protein Info for ABIE41_RS02880 in Bosea sp. OAE506

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 791 PF13641: Glyco_tranf_2_3" amino acids 48 to 164 (117 residues), 33.1 bits, see alignment E=1.1e-11 PF00535: Glycos_transf_2" amino acids 49 to 170 (122 residues), 71.8 bits, see alignment E=1.4e-23 PF00534: Glycos_transf_1" amino acids 591 to 733 (143 residues), 53.5 bits, see alignment E=4.3e-18 PF13692: Glyco_trans_1_4" amino acids 595 to 731 (137 residues), 28.7 bits, see alignment E=2.9e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (791 amino acids)

>ABIE41_RS02880 glycosyltransferase (Bosea sp. OAE506)
MNKYIRQFAVELRRNGPFFAIRKAVAFLRYRMFGRPPKFGTLVHDPLISVIVVSYNSQQD
LPVCLESLARQSYSHIEVIVVENGASDTQALVKSILPEATWLRASGNVGFAAGNNFGYAH
ARGELVALVNPDARLDEECLFELLQAFRFDGDIAVTTPKTRFWTRFADVHFESDTAFAIP
VAALESQLAYQKFFIRQGELDKAQGKVLSRRERRRDGTSKDAIILRLPVDGTHLSLTLPG
TGAIKVFSVGTGEQVFHPGESGVPLAISLQPRDHLSASWVINNAGTGVRAGGPFDIGFGE
KDELLYDSRANVPAFCGCVGLIRRAALIGRDIFRPEFFAYFEDSELSHHMQSLGYRIQYS
PRAIAYHKHSVSSSEGSPLWTTLVERSRLIYERYRGSKGAQPKLAAFLADRERYSAVPPA
LAETLARYDAAIGATARPGRTIGLYNSYWTTMGGGEAHAIGLALAMAGPDDEIFLICESD
FDIAELERRFGYDLSQCRKLVVSAMTREFTARFDVFVNSTFRSNLGSLAPQSYYVVSFPH
QEIRKAILQDYTFLFNSRFTETWAQRFWGPSRGVVVCPTFSTTAPPPEAYAAKEKLALSI
GRITDRGHAKNQHSMIEAFATTAGDPEFAAWRLALVGSFDQRDAQDGAYLARIVAMAKAD
PRVTILPNCPRDTINDLLGKAALYIHAAGLGQPETKPEYHEHFGIAPLEACLFGAWPIVY
AKGGPADLVKDLAFGDIYHDFDEFVTMLRDAMQRAATIDHEAVAASARAFCVENDVRFQS
YLTETANRYDG