Protein Info for ABIE41_RS01470 in Bosea sp. OAE506

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 20 to 156 (137 residues), 91.7 bits, E=1e-29

Best Hits

Swiss-Prot: 39% identical to HMUV_PSEE4: Hemin import ATP-binding protein HmuV (hmuV) from Pseudomonas entomophila (strain L48)

KEGG orthology group: K02013, iron complex transport system ATP-binding protein [EC: 3.6.3.34] (inferred from 43% identity to fpl:Ferp_0225)

MetaCyc: 34% identical to ferric enterobactin ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-10-RXN [EC: 7.2.2.17]

Predicted SEED Role

"Vitamin B12 ABC transporter, ATPase component BtuD" in subsystem Coenzyme B12 biosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.34

Use Curated BLAST to search for 3.6.3.34 or 7.2.2.17

Protein Sequence (251 amino acids)

>ABIE41_RS01470 ABC transporter ATP-binding protein (Bosea sp. OAE506)
MKLTVAGLSVRYSATQAIEAVDVAAHPGEVLAIIGPNGSGKSSLVKAIAGLVKHGGVVRF
DGSPVRPERIGYMPQDIGARAALTVLEAVLLGRLGRLGLRVRPEDLAAVEAVLGELDLMP
LASRYLGELSGGQRQLVFLAQALASEPALLLLDEPISALDIRHQLEVMEIVLRMTKSRGL
TTLVILHDLNIAARFADRVLVMRAGRAICCGRPEAVIDAAMVASVFGVEATLSADPDGRL
IVTPLRAIAAA