Protein Info for ABIE41_RS00510 in Bosea sp. OAE506

Annotation: IS91 family transposase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 404 PF14319: Zn_Tnp_IS91" amino acids 11 to 100 (90 residues), 117.6 bits, see alignment E=2e-38 PF04986: Y2_Tnp" amino acids 142 to 329 (188 residues), 204 bits, see alignment E=2.3e-64

Best Hits

Swiss-Prot: 61% identical to Y4QJ_SINFN: Putative transposase y4qJ (NGR_a01880) from Sinorhizobium fredii (strain NBRC 101917 / NGR234)

KEGG orthology group: None (inferred from 75% identity to mno:Mnod_8453)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (404 amino acids)

>ABIE41_RS00510 IS91 family transposase (Bosea sp. OAE506)
MARPSLEVADILNRHGEAYLARHRLSRGQLKVMGAIRACRTAALGGHVMACGDCDHATIA
YNSCRNRHCPRCQGAAAKDWLADRQADLLPVPYYHLVFTLPAPIAAIAYQNKAELYGLLF
KAAAETLATIAIDPRHLGARIGFTCVLHTWGSAMTHHPHLHIIAPGGGLSPDGSRWLSCR
PGFFLPVRVLSRLFRRLFLAGLSALHAAGRLAFHGDLADLTEADAFAAMLAPLRRAHWVV
YAKRPFGGPDAVLAYLARYTHRVAIANSRLVAMKRHGVTFHWKDYRARSSGKAWRKTMTL
TAPEFIRRFLLPVLPDGFHRIRHYGLHATGRRAATIARVRQIIAAATPATTTADRGAEIS
AEQSDPVDERRPPCPCCGGRMILVERFAPGTAPRTILAVRIDTS