Protein Info for ABIE40_RS25060 in Rhizobium sp. OAE497

Annotation: FAD-dependent monooxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 584 PF01494: FAD_binding_3" amino acids 6 to 370 (365 residues), 371.6 bits, see alignment E=4.5e-115 PF21274: Rng_hyd_C" amino acids 465 to 584 (120 residues), 72 bits, see alignment E=4.6e-24

Best Hits

Swiss-Prot: 56% identical to TFDB_CUPNJ: 2,4-dichlorophenol 6-monooxygenase (tfdB) from Cupriavidus necator (strain JMP 134 / LMG 1197)

KEGG orthology group: K10676, 2,4-dichlorophenol 6-monooxygenase [EC: 1.14.13.20] (inferred from 81% identity to rlg:Rleg_5534)

MetaCyc: 56% identical to 2,4-dichlorophenol 6-monooxygenase I (Cupriavidus pinatubonensis JMP134)
Phenol 2-monooxygenase. [EC: 1.14.13.7]; 2,4-dichlorophenol 6-monooxygenase. [EC: 1.14.13.7, 1.14.13.20]; 1.14.13.20 [EC: 1.14.13.7, 1.14.13.20]

Predicted SEED Role

"FAD-binding monooxygenase, PheA/TfdB family, similarity to 2,4-dichlorophenol 6-monooxygenase"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.13.20 or 1.14.13.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (584 amino acids)

>ABIE40_RS25060 FAD-dependent monooxygenase (Rhizobium sp. OAE497)
MADITTDVLIIGTGPAGSATAALLATYGVEPLVINRYRWLATTPRAHITNQRTMEVLRDL
GRDVEDEAYLFATEQELMGQNVFCTAVAGEEIGRMQSWGNHPLSQAEHILTSPGRMNDLP
QTYMEPLLFKTACSRGAQSRMSTEYLSHVQDGEGVTTTCLDRLTGKELTIRSKFLIGADG
GNSKVAEHAGLTFEGKMGVAGSMNILFEADLSRYVAHRPSVLYWVLQPGADVGGIGMGLV
RMVRPWNEWLIVWGYDINQPAPQVDDAFATKVVRELVGVPDLAPKIKSVSTWTVNNMYAT
TLSKGRVFCMGDAVHRHPPSNGLGSNTSIQDGFNLAWKLAMVLKGQAGAGLLDSYQAERA
PVAKQIVTRANKSIEEFGPIFKSLGLLDSVDPVKMQQNMDARCNDTDDAERQRAAIREAI
ASKVYEFDAHGVEMNHRYASNAVVKDDQPEPKFEKDAELHFQPTSWPGARLPHVWLFGQN
GEKISSLDLTGHGVFTILTGIGGDGWQAAAKAVAKEFGIQINVHKIGPRQVWQDLTGDWA
RAREIRDSGALLVRPDHHVAWRAEAAVPDAEGELRRVLKTVLDR