Protein Info for ABIE40_RS25060 in Rhizobium sp. OAE497
Annotation: FAD-dependent monooxygenase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 56% identical to TFDB_CUPNJ: 2,4-dichlorophenol 6-monooxygenase (tfdB) from Cupriavidus necator (strain JMP 134 / LMG 1197)
KEGG orthology group: K10676, 2,4-dichlorophenol 6-monooxygenase [EC: 1.14.13.20] (inferred from 81% identity to rlg:Rleg_5534)MetaCyc: 56% identical to 2,4-dichlorophenol 6-monooxygenase I (Cupriavidus pinatubonensis JMP134)
Phenol 2-monooxygenase. [EC: 1.14.13.7]; 2,4-dichlorophenol 6-monooxygenase. [EC: 1.14.13.7, 1.14.13.20]; 1.14.13.20 [EC: 1.14.13.7, 1.14.13.20]
Predicted SEED Role
"FAD-binding monooxygenase, PheA/TfdB family, similarity to 2,4-dichlorophenol 6-monooxygenase"
MetaCyc Pathways
- 2,4-dichlorophenoxyacetate degradation (1/2 steps found)
- 4-chloro-2-methylphenoxyacetate degradation (1/2 steps found)
- chlorinated phenols degradation (1/4 steps found)
KEGG Metabolic Maps
- 1,4-Dichlorobenzene degradation
- Naphthalene and anthracene degradation
- Toluene and xylene degradation
- gamma-Hexachlorocyclohexane degradation
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.14.13.20 or 1.14.13.7
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (584 amino acids)
>ABIE40_RS25060 FAD-dependent monooxygenase (Rhizobium sp. OAE497) MADITTDVLIIGTGPAGSATAALLATYGVEPLVINRYRWLATTPRAHITNQRTMEVLRDL GRDVEDEAYLFATEQELMGQNVFCTAVAGEEIGRMQSWGNHPLSQAEHILTSPGRMNDLP QTYMEPLLFKTACSRGAQSRMSTEYLSHVQDGEGVTTTCLDRLTGKELTIRSKFLIGADG GNSKVAEHAGLTFEGKMGVAGSMNILFEADLSRYVAHRPSVLYWVLQPGADVGGIGMGLV RMVRPWNEWLIVWGYDINQPAPQVDDAFATKVVRELVGVPDLAPKIKSVSTWTVNNMYAT TLSKGRVFCMGDAVHRHPPSNGLGSNTSIQDGFNLAWKLAMVLKGQAGAGLLDSYQAERA PVAKQIVTRANKSIEEFGPIFKSLGLLDSVDPVKMQQNMDARCNDTDDAERQRAAIREAI ASKVYEFDAHGVEMNHRYASNAVVKDDQPEPKFEKDAELHFQPTSWPGARLPHVWLFGQN GEKISSLDLTGHGVFTILTGIGGDGWQAAAKAVAKEFGIQINVHKIGPRQVWQDLTGDWA RAREIRDSGALLVRPDHHVAWRAEAAVPDAEGELRRVLKTVLDR