Protein Info for ABIE40_RS24395 in Rhizobium sp. OAE497

Annotation: glycosyltransferase family 2 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 474 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 342 to 368 (27 residues), see Phobius details amino acids 380 to 400 (21 residues), see Phobius details amino acids 420 to 443 (24 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 81 to 320 (240 residues), 31.7 bits, see alignment E=1.5e-11 PF13632: Glyco_trans_2_3" amino acids 182 to 395 (214 residues), 80.2 bits, see alignment E=1.9e-26

Best Hits

KEGG orthology group: None (inferred from 60% identity to pzu:PHZ_c2485)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (474 amino acids)

>ABIE40_RS24395 glycosyltransferase family 2 protein (Rhizobium sp. OAE497)
MDMISISGQYALLTLFFVVQIAYSLSLGLNFFFASLPTNMVTQADIDAVTEDECPFIVLF
YPVLRELEGTMRTTFTSLSQLRYPKHRYKVVAIPNENDYETVASLRRLKQEFSFLEIVEV
PPTTHPSWQAVWDGWDSTRKAYWWHEGHRAYNRDLPPKKTRQLVYAFYNVAKKFEGREDF
LVNYIDADSCPPADHFLAGAAGMKKYDVLQAQNIAGNLNESMAATWHAADHMSWDGLTYP
HLTANGRQPYWVLGKGLFFRASDLIELGGFHPWITIEDPEVGMRFWTNGRKLGVIENPLI
EEVPSTLMHGITQRKRWVCGFFQSLTSPLTSMGMTRWQKFRAWLNFLPCLSMSINTIGIP
IGIWAMWQYFSGQGNLPAEAAIFPILNLSMFSLLLLRLYISVWTRSKLVAESVWTRVWYL
VRINPVSLMVWWLIWLIPLYIGLRMYIKDQGLVWERTVKTNANEDLIMTQIAAE