Protein Info for ABIE40_RS23200 in Rhizobium sp. OAE497

Annotation: chromate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 183 signal peptide" amino acids 1 to 6 (6 residues), see Phobius details transmembrane" amino acids 7 to 29 (23 residues), see Phobius details amino acids 74 to 96 (23 residues), see Phobius details amino acids 115 to 132 (18 residues), see Phobius details amino acids 138 to 154 (17 residues), see Phobius details amino acids 161 to 180 (20 residues), see Phobius details PF02417: Chromate_transp" amino acids 9 to 170 (162 residues), 120 bits, see alignment E=5.6e-39

Best Hits

KEGG orthology group: None (inferred from 48% identity to bpy:Bphyt_2219)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (183 amino acids)

>ABIE40_RS23200 chromate transporter (Rhizobium sp. OAE497)
MRDNPLIGLALVFIPFSLTSIGGGAAIIAGLQNETVNVHGWLTQAEFLHLFGVSRAAPGP
GTMLATVIGWKVSGWLGALIASLALFLPSSLLCYAVFRLTNTHRDKEWHRAMREGLAPIG
TGLIIAGVISLFRVAEGGVLALVIAALSCGLLYWKPKMPVVAVLALGGTAAALAHCWPQL
TGF