Protein Info for ABIE40_RS22315 in Rhizobium sp. OAE497

Annotation: methyltransferase domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 270 PF13489: Methyltransf_23" amino acids 30 to 148 (119 residues), 40.5 bits, see alignment E=7.3e-14 PF01209: Ubie_methyltran" amino acids 35 to 153 (119 residues), 68.7 bits, see alignment E=1.6e-22 PF13847: Methyltransf_31" amino acids 42 to 150 (109 residues), 55.8 bits, see alignment E=1.4e-18 PF13649: Methyltransf_25" amino acids 44 to 138 (95 residues), 78 bits, see alignment E=2.2e-25 PF08241: Methyltransf_11" amino acids 45 to 142 (98 residues), 84.1 bits, see alignment E=2.6e-27 PF08242: Methyltransf_12" amino acids 45 to 140 (96 residues), 52.4 bits, see alignment E=2.2e-17

Best Hits

KEGG orthology group: None (inferred from 75% identity to mlo:mll4858)

Predicted SEED Role

"ubiquinone/menaquinone biosynthesis methyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (270 amino acids)

>ABIE40_RS22315 methyltransferase domain-containing protein (Rhizobium sp. OAE497)
MREGDDVFAGSIPENYDRHMVPLIFAPFAADLGRRAVALSPQAVLETAAGTGVVTRALAP
RLAVGARYVATDLNRSMLDYAASQQDGGNTVEWRQADALALPFEDASFDLVCCQFGTMFF
PDRPAAYREARRVLKPGGHFLFSVWDRIEENVFANDVTEELADIFPDDPPRFLARTPHGY
HDKALIRSDLEAAGFSSITIETRAEESHAASVRIVALAYCQGTLLRTEIEARKPGELQAV
TDYVALELARKHGDGAVAAKIQAHVILAGG