Protein Info for ABIE40_RS21085 in Rhizobium sp. OAE497

Annotation: MurR/RpiR family transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 295 PF01418: HTH_6" amino acids 12 to 84 (73 residues), 41.1 bits, see alignment E=1.4e-14 PF01380: SIS" amino acids 140 to 257 (118 residues), 43.3 bits, see alignment E=3.1e-15

Best Hits

KEGG orthology group: None (inferred from 56% identity to bbt:BBta_3194)

Predicted SEED Role

"Transcriptional regulator, RpiR family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (295 amino acids)

>ABIE40_RS21085 MurR/RpiR family transcriptional regulator (Rhizobium sp. OAE497)
MTEKDGADGTVSQRIRVLRDRLPPAELAVANSISENYPMGGLVPIVQLAANAGTSPPTVV
RFVRKMGFEGYPEFQEALRQEAQNRLFSPVGSYPNNRASSDESSPAGQAQLVYLESIRNT
FASLSDDEIANAVRLLCDREHDIVVVGGRFSQVLAQQLYRYLSILRPQVRLSVPDIHSLV
DISPSTVAVIFDFRRYQQTTINWGIEAINKGAKIILVTDQYLSPLASKATALLTASNKGL
EPFDSMTAAFALTELLISETARTLGEPARSRLTEFVQRQDDEDRLILKFEPPVRD