Protein Info for ABIE40_RS17205 in Rhizobium sp. OAE497

Annotation: lysylphosphatidylglycerol synthase domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 322 transmembrane" amino acids 7 to 27 (21 residues), see Phobius details amino acids 44 to 68 (25 residues), see Phobius details amino acids 81 to 103 (23 residues), see Phobius details amino acids 122 to 145 (24 residues), see Phobius details amino acids 158 to 180 (23 residues), see Phobius details amino acids 198 to 219 (22 residues), see Phobius details amino acids 231 to 251 (21 residues), see Phobius details amino acids 270 to 295 (26 residues), see Phobius details PF03706: LPG_synthase_TM" amino acids 13 to 289 (277 residues), 48.3 bits, see alignment E=5.1e-17

Best Hits

KEGG orthology group: K07027, (no description) (inferred from 54% identity to rle:pRL120738)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (322 amino acids)

>ABIE40_RS17205 lysylphosphatidylglycerol synthase domain-containing protein (Rhizobium sp. OAE497)
MPGKRLIINATLVLGLLLAAYLLYKVFSRYSLDEVMQSIAAIPVSRLAAGVGFAALSYLC
LTGFDWMGLRYAGKPLSYPKAAIASFTGLSIGHNLGVAALSSGAVRYRYYSRWGLSTEEV
AKVILFCGVTVGIGLAALAGIALLVNPADAANLLKLSPSGLFGLGLACLAIPIAYVVLSA
TVRAPLRLWNWSFEMPALKLAIGQVVIGTLNFIFVSACLHQMLAAQGEASFVQTATAFVL
ANIAILMTHVPGGLGVLEATVSHVLPGAASIGALVAFRVIYFLLPLVIGLPILGIGELML
RKRKPSSEEHADEAADAQAQPM