Protein Info for ABIE40_RS14670 in Rhizobium sp. OAE497

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1128 transmembrane" amino acids 46 to 66 (21 residues), see Phobius details amino acids 72 to 91 (20 residues), see Phobius details amino acids 110 to 132 (23 residues), see Phobius details amino acids 145 to 165 (21 residues), see Phobius details amino acids 176 to 196 (21 residues), see Phobius details amino acids 224 to 243 (20 residues), see Phobius details amino acids 264 to 292 (29 residues), see Phobius details amino acids 312 to 332 (21 residues), see Phobius details amino acids 364 to 385 (22 residues), see Phobius details amino acids 391 to 410 (20 residues), see Phobius details amino acids 431 to 453 (23 residues), see Phobius details amino acids 461 to 480 (20 residues), see Phobius details amino acids 573 to 595 (23 residues), see Phobius details amino acids 609 to 630 (22 residues), see Phobius details PF00512: HisKA" amino acids 677 to 742 (66 residues), 59.2 bits, see alignment 5.1e-20 PF02518: HATPase_c" amino acids 789 to 898 (110 residues), 86.8 bits, see alignment E=2.2e-28 PF00072: Response_reg" amino acids 924 to 1033 (110 residues), 77 bits, see alignment E=1.9e-25

Best Hits

KEGG orthology group: None (inferred from 88% identity to ara:Arad_3481)

Predicted SEED Role

"Two-component hybrid sensor and regulator"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1128 amino acids)

>ABIE40_RS14670 ATP-binding protein (Rhizobium sp. OAE497)
MAARQRIIPVRREYNRWVANQTLEDYALRFTAKSARQFSSQRISQTAIGAISFLALEAIG
GAITLSYGTTNAFFAIIVASIAMLMIGLPISRYAIRHGVDIDLLTRGASFGYIGSTITSL
IYASFTFMLFAIEASIMSGALELTLGIPLWIGYIISAVMVIPLVTHGVKLISRFQLVTQP
FWIILNVLPFIFIAFLDWEKFDVWRAFAGIRHASGPPGTVADFNLVEFGAASAVILALMS
QIGEQADFLRFLPPDGQRKWRHRLAVFLAGPGWVIIGAPKLLAGSFLVVLTFTAGVPVDR
AADPAQMYLTAFGYMIPWHNAALLLMAAFVVVSQLKINVMNAYAGSLAWSNFFSRLTHSH
PGRVIWLIFNVAIALLLMELGIYRLLEETLGIFSIIAMAWLCTISADLFINKPLGLAPPG
IEFKRAHLYDINPVGLGAMTLSAGISLIAHFGAFGPIAASLAPYITLVIALTASPLIAWA
TKGKFYLARKPRHSWKNLTSITCSVCEHPFEPEDMAWCPAYAAPICSLCCSLDSRCHDMC
KPKARLNAQVGTVAKAVLPETVVQKLTTRLGRYGIAVVLALTAVGAILAMIAHQVASASP
ETAEVVNRTILIVFFVFAVIAGVVCWFYVLAHDSRVVAEEESSRQNTLLLKEIAAHKKTD
AALQNAKETAEAANRAKSRYVVGLSHELRTPLNAVLGYAQILERDETIPPPRQSSIKVIR
RSAEHLSGLIDGLLDISKIEAGRLQVYSNEINIQDFLDQIVDMFRPQAQAKGLAFIHDRT
PSLPQFVRTDEKRLRQILVNLLSNAIKFTDEGSVTFDVGYRSQVATFTVSDTGRGIAEKD
LSRIYEPFQRGEADSIRPMPGLGLGLTITRLLTNTLGGEILVTSEKDQGSTFRVRLMLSA
VMREMTAPPQEKKIVSYDGPRRTIVVVDDNEDHREMMREILAPLDFVVLTAASGTDCLTL
IEGIQPDLFLVDISMPGMSGWQLASRLRENGQTSPIVMLSANIGDAAATAESDDSHNDAI
GKPVDIRQLRDKLALHLGLKWTYADTAAAPAPPPKPPLVSPGIAHVAELMRLCEIGYIRG
IEAKLNDLAKDEANQPFTEELRTYVAAFDLDGCMTFLHRFNEKVETIG