Protein Info for ABIE40_RS11800 in Rhizobium sp. OAE497

Annotation: cell division protein FtsA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 443 TIGR01174: cell division protein FtsA" amino acids 25 to 405 (381 residues), 342.6 bits, see alignment E=1.4e-106 PF02491: SHS2_FTSA" amino acids 114 to 187 (74 residues), 69.2 bits, see alignment E=6.3e-23 PF06277: EutA" amino acids 206 to 281 (76 residues), 28.2 bits, see alignment E=1.9e-10 PF14450: FtsA" amino acids 232 to 402 (171 residues), 116.7 bits, see alignment E=1.7e-37

Best Hits

Swiss-Prot: 86% identical to FTSA_RHIME: Cell division protein FtsA (ftsA) from Rhizobium meliloti (strain 1021)

KEGG orthology group: K03590, cell division protein FtsA (inferred from 96% identity to ret:RHE_CH02841)

Predicted SEED Role

"Cell division protein FtsA" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (443 amino acids)

>ABIE40_RS11800 cell division protein FtsA (Rhizobium sp. OAE497)
MSLFGSSHFGLPRLKPLSSKRSHIVSVLDIGSTKVVCMIGRLTPREESEILPGRTHDIEI
IGIGHQRSRGIKTGVIADLDALESVIRLAVDAAERMAGLTVESLIVNLTAGRLGSDVYTA
TIDLGGQEVELNDLKKVLAAACQQSLRQDRAVLHSLATGFSLDGERGIRDPLSMYGDMLG
VDMHVVTAERAALKNLELSVNRAHLSVEGIVATPYASGLAALVDDEVELGCAAIDMGGGT
TTISVFAEGKLVHTDAVGLGGHHVTTDLARGLSTRIEDAERLKVVHASAMSNSSDERELI
SIPPIGEDERDLPTQVPRALVSRIVGARIEETMELIRDRIQRSGFSPIVGKRVVLTGGAS
QLTGLADVARKILARNVRIGRPMGVSGLPTAAKGPAFSTAVGLMIYPQVADMETHASQSG
LLLSLGGNNSRIARMGQWLKESF