Protein Info for ABIE40_RS11025 in Rhizobium sp. OAE497

Annotation: putative Ig domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1325 PF17963: Big_9" amino acids 74 to 157 (84 residues), 35.7 bits, see alignment 3e-12 amino acids 435 to 518 (84 residues), 39.8 bits, see alignment 1.5e-13 amino acids 609 to 694 (86 residues), 39.3 bits, see alignment 2.3e-13 PF05345: He_PIG" amino acids 172 to 254 (83 residues), 37.4 bits, see alignment 7.3e-13 amino acids 271 to 350 (80 residues), 44.7 bits, see alignment 3.8e-15 amino acids 542 to 618 (77 residues), 50.5 bits, see alignment 5.7e-17 amino acids 718 to 794 (77 residues), 61.9 bits, see alignment 1.6e-20 amino acids 812 to 889 (78 residues), 43.6 bits, see alignment 8.1e-15 PF00041: fn3" amino acids 366 to 432 (67 residues), 26.6 bits, see alignment 1.5e-09

Best Hits

Predicted SEED Role

"Fibronectin type III domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1325 amino acids)

>ABIE40_RS11025 putative Ig domain-containing protein (Rhizobium sp. OAE497)
MTFSVVASDATSYQWQVNTGGGGYANIINGAPYSGATTATLTITGATAGMDGYQYRVIAS
GGALPDATSAGVSLTINSPPVATSFAVAIVPYGSSAANIALNTHVTNSPTSYAVGSATTA
QGGSVSVDPGTGAVTYTAPTGFRGTDSFTFTASNSAGPSSPATVTVPVGNPTITVTPTTL
TAGTGSAAYSQTLTASAGRAPYTFSTTLASGALPAGISLGSNGTISGTPTASGNFTFTVT
GTDSSLGTGPFTFTSSTISLNIAAPTISIGPTTLPAPAFGTAYAQTLTASGGNGSYTFGI
SAGSLPAGMILSASGALSGTPTAAGDFSFTAEATDGNGFTGSQTYSGTVNAVVPGIPTIG
SATAADGEATVSFSAPASNGGAVITNYTVTSSPGGLTATGSASPITVSGLTNGTAYTFTV
TANNSTGAGTASAASNSVTPAPSLAAPIANAVSATVAANSSANPVTLNINGGTAATVAIA
VVPSHGTATASGTAITYTPVAGYSGADSFTYTATNATGTSSPATVTITVTAPTFTFAPAP
GALIAGTAGTAYSETIAASGGGALYIYAVTTGSLPSGLSLATDGTISGTPTADENASFTI
TATDTHGATGTVSYSLVIGAQAPFANGVSATVAANSSANPITLDITGGAPASVAVASAAG
HGTATASGTAMTYTPVAGYSGADSFTYTATNATGTSSPATVNITVTAPTFTFAPAAGALA
TGTAGTAYSETIAASGGGVPYTYAVTTGSLPSGLSLATDGTISGTPTADGNFSFTITATD
TNGATGTASYSLQVDVAGSATFVFTPAAGALSEAMAGEDYSQAISAAGGTAPLIYSVSSG
TLPQGMVLNISTGELSGPLDASTEGDYGFSIQVRDNNGATGTAAYTLKVKAQDITVTDKV
VNVPAGSSPSDVYLNRGATGGPFTSAAVTFVEPANAGSSAIIQGQLAQSGPVMPVGWYLQ
FTPNPAYSGQVRVGFRLTSALGVSNTGTVTYNLNVAAGQVAEDIDHLVHDFVRSRQNMIS
STVKVPGLLERRQMQQESNPVTARLMPSENGLTVGFSTSLAQMEAAGRTPVGGKSADLSP
FNIWIDGAFLAHRDGDTDDGKWGSFAMINLGADYLLSDKALLGFSLHYDRMTDPTDADAE
LSGNGWLAGPYASFEIGKDVFWNASLLYGGSSNDIDTYFWDGTFDTTRWMADTSIEGQWA
IDGDTILTPKLRAVYFSERVEDYAVSNGAGDTIVIDGFDAEQFRISLGAEIARSFTVESG
SVLTPKLGLTTGFSGLDGSGAFGSLTAGLSIQTVDQWMIDVSLLLNVEGDGEASAGTRVG
AAKRF