Protein Info for ABIE40_RS10175 in Rhizobium sp. OAE497

Annotation: acyloxyacyl hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 191 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF09411: PagL" amino acids 107 to 190 (84 residues), 72.7 bits, see alignment E=1.7e-24

Best Hits

KEGG orthology group: None (inferred from 73% identity to rec:RHECIAT_CH0002395)

Predicted SEED Role

"Outer membrane receptor proteins, mostly Fe transport" in subsystem Hemin transport system

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (191 amino acids)

>ABIE40_RS10175 acyloxyacyl hydrolase (Rhizobium sp. OAE497)
MNGCIRKVVLRFLSASTVAVLAAGASSLPAHAQDQIFDELRFGATASIQGGSEHEDGVFP
EVTLFFDPFGHDEATGLQKLARPRIHLGTSIGTSGSATQVFTGLSWTADFSEKLFAEAGF
GGVIHTGELDHNDDGPALGCRVLFHEYIGAGYRFDNHWNVMAQVAHSSHANLCDGPNNGM
TRAGLQLGYKF