Protein Info for ABIE40_RS06375 in Rhizobium sp. OAE497

Annotation: endolytic transglycosylase MltG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 406 transmembrane" amino acids 51 to 76 (26 residues), see Phobius details PF02618: YceG" amino acids 93 to 370 (278 residues), 282 bits, see alignment E=2.8e-88 TIGR00247: conserved hypothetical protein, YceG family" amino acids 195 to 371 (177 residues), 196.3 bits, see alignment E=3.6e-62

Best Hits

KEGG orthology group: K07082, UPF0755 protein (inferred from 82% identity to rlt:Rleg2_1060)

Predicted SEED Role

"FIG004453: protein YceG like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (406 amino acids)

>ABIE40_RS06375 endolytic transglycosylase MltG (Rhizobium sp. OAE497)
MSDTNQSNETPGQGEQQAQNGRIIPKSPTEALRPERVPEPPKRSKKARSQVVIFLNFVMT
LVVLGCAAAVFAFYYAISSYQDPGPLETNTNFIVRSGAGLSEISSNLERNNIISDARIFR
YLTATHLNEGESLKAGEYEIKAKASMNDIMELLKSGKSILYSISFPEGLTVRQMFNRMND
DQVLEGELPTVLPAEGSLRPDTYKFSRGTKRGEIVDQMAAAQTKLVEQIWDKRDPALQLK
SKEELVALASIVEKETGVPDERAHVASVFLNRLGKGMRLQSDPTIIYGLFGGDGKPADRP
IYQSDLKKDTPFNTYIIKGLPPTPIANPGRDALEAVANPWKTEDLYFVADGTGGHVFAAT
LDDHNANVRRWRKLEADKGADPNIAVDGQPEAQADAPAAQKKKKTN