Protein Info for ABIE40_RS03020 in Rhizobium sp. OAE497

Annotation: glycosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 638 PF13844: Glyco_transf_41" amino acids 252 to 404 (153 residues), 73 bits, see alignment E=8.3e-25 amino acids 418 to 603 (186 residues), 173.5 bits, see alignment E=2.9e-55

Best Hits

KEGG orthology group: None (inferred from 70% identity to rle:RL0717)

Predicted SEED Role

"FIG00984181: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (638 amino acids)

>ABIE40_RS03020 glycosyl transferase (Rhizobium sp. OAE497)
MNSKVSFSVASREFQAGRYTQSLATLNQLIDTQKDAKTYALLAKNLLQLGFKSDAAKSYG
LAAKAGGANAYEYYKLAARLHYDCGEHDEALVICMRNFEKAQKDPDLAFILVSVFYARQQ
RDLIQPLKNVLSKSSNREHLQAAATLVSNDLSDPSNEQLARNIFKRFPKDFSARFLYLIF
LREFNDYEESLRHQKVVDDAVLDGRPEVLRKDHPFYHLHWCGNEDLNRLPMVGVPKLDPD
KVAARRAQPHAWSDKIRIGYMSADFWDNHATMKLMQRVLELHDRDKFEIVLFDHSGPYAL
LNNKTDRSKWGTIVDIHGVSDQEVLRLVREHNIDIMVDLKGHTADSRANSFNIPLAPVHV
AWLGFPGSTLGIDLDYVIGDQFVLPDVAKPFYHEKFCRMPESYQPNDPSNRPQPKPVTRE
QYGLADDAFVFASFNGNRKITPEAIASWTRILKRAPNSVLWLMSNSPRNEENLRKAFRAS
GIAANRIIFCARTGYQEHIDRIQAADLGIDTFPVNGHTTTSEQLWGGLPVLTMKGTNFAS
RVSESLLNAIGLPELVGKNLQDYEDMAVELANNREKVTAYKAHLAEQRYIAPLFDAERFC
KHLEQAFVTMADRAKRGEAPDHFDVPALPARTQPFWTA